Panicum virgatum (switchgrass): 120687982
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Entry
120687982 CDS
T07260
Name
(RefSeq) presenilin-like protein At2g29900
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120687982
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A22: presenilin family
120687982
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Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
120687982
NCBI-ProteinID:
XP_039826032
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Position
9N:complement(17317539..17319192)
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AA seq
448 aa
AA seq
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MADAAAAVPGDPPASATVLDSLGEDITRIVYPVSACMLLVVLLVSLLSSPSSPSPLSASI
AAATGGGDDIPTALFTALTFVVAVTAATFLLALLFYLRCTPCLRAYLGFSALAVLLVLGG
QVALLLISRLRLPLDAVSFALLLPNAAGALALAALAPASVPIGLHQAALVAVAVLTAFWF
TLLPEWTTWALLVAMAVYDLAAVLLPGGPLRVLLELAIERNEEIPALVYEARPVDPRHGR
NWRLWREGRQPGADLDASSTTVEAIGEVLGRNLDANSGNSSSPQVHDAATPTANVNNSRP
RATLWAALSSDSTVEHAGEASALQEHRVAVAEMRVPLIQPRPERSGEEEEDEDGIGLSSS
GAIKLGLGDFIFYSVLVGRAAMYDYMTVYACYLAIIAGLGITLLLLAFFRKALPALPVSI
ALGIVFYVLTRTLLEEFVVQCSTNLLLF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcggcggccgccgtccccggcgatcccccggccagcgccaccgtgctggac
tcgctcggcgaggacatcacccgcatcgtctaccccgtctccgcctgcatgctcctcgtc
gtccttctcgtctccctcctctcctcgccctcctccccgtcgcccctctccgcctccatc
gccgccgccaccggcggaggggacgacatccccaccgcgctcttcaccgccctcaccttc
gtcgtcgccgtcacggccgccaccttcctgctcgcgctcctcttctacctccgctgcacg
ccctgcctccgcgcctacctcggcttctccgcgctcgccgtcctgctcgtgctcggcggc
caggtcgccctgctcctcatctcccgcctccgcctcccgctcgacgccgtctccttcgcg
ctcctcctccccaacgccgcgggggcgctcgcgctcgccgcgctggcgccggcctccgtc
cccatcgggctccaccaggccgcgctcgtcgccgtcgccgtgctcaccgccttctggttc
acgctgctccccgaatggaccacctgggcgctgctcgtcgccatggccgtctacgacctc
gccgccgtgctgctccctggtggccctctgagagtgctgcttgagctcgccatagagagg
aacgaggagataccggcgctggtctacgaggcgaggccggtggatccccgacacggccga
aattggcgcttgtggagggaagggaggcagcctggcgcggatttggatgccagttccacc
acggtcgaggcgattggggaggtattggggaggaatcttgatgccaattctggaaacagt
tcgtcgccccaagttcatgatgctgccactccaactgctaatgttaacaattcgaggccc
agggcgacattgtgggctgctttgagctcagattctacagttgaacatgctggggaggca
tccgcattgcaggagcatagagtggctgttgctgaaatgagggtacctttgatccagcca
cgtccagagagatctggggaagaggaggaagatgaagatggcattgggttgagctcatct
ggggcaatcaagctcgggttgggggacttcatattctacagtgttctggtcggtagggcg
gcgatgtatgactacatgacagtgtatgcctgctaccttgccatcattgctgggcttggc
atcactctcctcctgctggcgttcttccgcaaggcattgcctgccctaccggtttccatc
gcccttggcattgtgttttatgtgctcacaagaacattgcttgaggaatttgttgtgcaa
tgctccaccaatcttttgctgttctag
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