KEGG   Panicum virgatum (switchgrass): 120687985
Entry
120687985         CDS       T07260                                 
Name
(RefSeq) splicing factor 3A subunit 2-like
  KO
K12826  splicing factor 3A subunit 2
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120687985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120687985
Spliceosome [BR:pvir03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120687985
 Complex B
    120687985
 Complex C
   U2 SnRNP specific factors
    120687985
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus
Other DBs
NCBI-GeneID: 120687985
NCBI-ProteinID: XP_039826035
LinkDB
Position
9N:70387699..70390414
AA seq 312 aa
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSVKIGRPGYTVTKQ
YDPDTKQHSFLFEIGYPEIEDNTKPRHRFMSSYEQKVETWDKRYQYLLFAAEPYEIIGFK
IPSTEIDKSADKFFSYWDPDKKEYLLQLYFKPRPPEANKPPPAPPGTLPNGTGGPSAPPR
PPGQVPPPPPQIPPPPHAPPPAPMGMPPRIPPPPIGSAQPPPPPPPANGPPRPMIPPPPN
FTPGAPPPRPPM
NT seq 939 nt   +upstreamnt  +downstreamnt
atggatcgtgagtggggctcgaagcccggcagcggcggcgccgcctccgcccagaatgag
gccatcgaccggcgggagcgcctccgccgcctcgccctcgagaccatcgacctcgcgaag
gacccctacttcatgcgcaaccacctcggcagctacgagtgtaagctgtgcctgacgctg
cacaacaacgaggggaactacctggcgcacacgcagggcaagcggcatcagaccaacctc
gccaagcgcgccgcacgcgaggccaaggacgcgcccgcgcagccccaacccaacaagcgc
aagctcgcaccgcgcaagtctgttaagatcggcagacctggttatacagtaaccaaacaa
tatgatcctgacaccaagcaacactcatttctttttgagattggttaccctgaaatcgaa
gacaataccaagccaaggcaccgtttcatgtcatcatatgaacagaaagttgaaacttgg
gacaagaggtatcaatacctactttttgcagcagagccctacgaaatcattggatttaag
ataccaagcacagagattgacaaatcagcagataaattcttctcttattgggatcctgac
aagaaggagtacctgctgcaactgtacttcaagccaagaccaccggaagctaataagcca
ccaccggctcctcctgggactttgcctaatgggactggaggtcctagtgctccaccaagg
ccaccgggacaagttccaccgcccccgccacaaattccaccgccccctcacgcacctcct
cctgcacctatgggaatgcccccaaggatccctccgccaccaattgggagtgctcaacct
ccaccaccaccgccacctgctaatggacctccacgtccaatgattccaccgccacctaac
tttactcctggagcaccaccaccgcgccctccaatgtaa

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