Panicum virgatum (switchgrass): 120688074
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Entry
120688074 CDS
T07260
Name
(RefSeq) programmed cell death protein 2-like isoform X1
KO
K14801
pre-rRNA-processing protein TSR4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120688074
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120688074
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
zf-MYND
Motif
Other DBs
NCBI-GeneID:
120688074
NCBI-ProteinID:
XP_039826152
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Position
9N:67854529..67859373
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AA seq
415 aa
AA seq
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MESSADKLRGLRITSLDEDDDETVVPHQALPGPAAAAADYEDDDEDEEEAEVTLGVLKKP
KRPGLLLRHLFPSKAGGIPAWLDPVNVPSGKSSCCGFCGEPLQFLLQIYAPIVDNAAAFH
RTMFVFMCSSMACLLRDQHEQWNHKHGNPCRSIKVFRCQLPRTNAFYSPEPPRHDGSDKP
LCPGAPVCHWCGTWKGDKICSSCKKTRYCSEKHQALHWCTGHKNDCLQLISSSDASKSVL
PAIGKVPASTSWPEFEIEIDFEDTFDSDSCDENNSKSLVMHRHGKPDAMMQSWMDHFEAD
ADNKCWASFQERVSRAPNQVLRYCREPNAKPLWALSSGCPSNADIPSCSSCKGPLCYEFQ
IMPQLLYYLGVGNQPDSLDWATIAVYTCQGSCDQNVSYKEEFAWVQLYPTTTLMR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagcgccgataaacttcgcggcctccgcatcacctccctggatgaggatgat
gacgagaccgtggttccgcaccaggcccttccgggcccagccgccgcggcagcggattac
gaagacgacgacgaggatgaggaagaggcggaagtgacccttggtgtccttaagaagccg
aagcgcccaggcctcctcctccgccacttgttccccagcaaggccggcggcatcccggcg
tggctggaccccgtgaacgtgccttccgggaaatccagctgctgtggtttctgtggcgag
cctctgcagttcctcctccagatttatgctccaattgtggacaatgccgcagcattccac
cgaaccatgttcgtgttcatgtgctcgtcgatggcgtgcttgctccgagatcagcatgaa
cagtggaatcacaagcatgggaatccatgtcgaagcatcaaggttttccggtgccagttg
ccacggactaatgccttctactcacctgaacctccaaggcatgatggctctgacaagcca
ctatgtccaggagctcctgtatgtcactggtgtggtacctggaaaggtgataaaatatgt
agtagctgcaagaaaacaagatactgttctgagaaacatcaggcactccattggtgcact
ggtcataaaaatgattgcctccagttaatcagttcttctgatgcttcaaaatctgttctg
ccggctataggaaaagttcctgctagcacttcctggccagaatttgagatagaaattgac
tttgaggatacctttgattctgatagttgtgatgaaaataactcgaagtccttggtaatg
cacagacatgggaaaccagatgctatgatgcagtcatggatggatcattttgaggctgat
gctgacaacaagtgctgggcatcttttcaagagcgtgtctcaagagcaccaaaccaagtc
ttgaggtattgtcgagaaccaaatgctaaacctctctgggcgttatcttcagggtgtccg
tcaaatgctgatattccatcatgtagctcctgtaaaggtccattatgctatgaatttcag
ataatgccacaattgctttattatttgggtgtgggaaaccaaccagactcacttgactgg
gcaacaattgctgtttacacatgtcaagggtcatgtgaccaaaatgttagctacaaagag
gaatttgcttgggttcagttgtaccctacaacaaccctgatgcgttga
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