Panicum virgatum (switchgrass): 120688077
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Entry
120688077 CDS
T07260
Name
(RefSeq) 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like
KO
K09458
3-oxoacyl-[acyl-carrier-protein] synthase II [EC:
2.3.1.179
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00780
Biotin metabolism
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir01240
Biosynthesis of cofactors
Module
pvir_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120688077
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
120688077
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120688077
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.179 beta-ketoacyl-[acyl-carrier-protein] synthase II
120688077
Lipid biosynthesis proteins [BR:
pvir01004
]
Fatty acid synthase
Component type
120688077
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Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
DUF6790
Motif
Other DBs
NCBI-GeneID:
120688077
NCBI-ProteinID:
XP_039826159
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Position
9N:complement(60028495..60035348)
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AA seq
496 aa
AA seq
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MAAPVAPPLCTWLVAACLSAACGVGEKEKQRRHRGAGVGVGGLFGSRHRPGSRRRGGARS
GMSMAVALHPERGVVETKKTDVKQRRVVVTGMGVVTPLGHDPDEFYNNLLQGVSGVSEIE
AFDCSSYPTRIAGEIKSFSTDGWVAPKLAKRMDKFMQYLITAGKKALENAGITEEIMNEL
EKSRCGVLIGSAMGGMKVFSDAIEALRVSYKKMNPFCVPFATTNMGSAILAMDLGWMGPN
YSISTACATSNFCILNAANHIRKGEADLMLCGGSDAPIIPIGLGGFVACRALSQRNSDPT
RASRPWDVDRDGFVMGEGSGVLVLEELEHAKQRGAEIYAEFLGGSFTCDAYHMTEPHPEG
RGVILCIENALADSGVTKEDINYINAHATSTQMGDLKEFEALTRCFGQNPQLRVNSTKSM
TGHLLGAAGGIEAVAAIQAIRTGWVHPNINLDNPEKNVDVSLLVGPQKERCDVKVALSNS
FGFGGHNSSILFAPFK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggtggcgccaccgctgtgcacctggctcgtcgccgcctgcctctctgcg
gcctgcggtgttggcgagaaggagaagcagcgaaggcaccgcggtgccggcgttggcgtc
gggggtctgttcggctcgcgccaccgccccggctctcggcgccgtggtggggctcgctct
ggaatgtccatggctgttgccttgcatcctgaaaggggagttgtggaaactaagaaaact
gatgtcaaacaaaggagagtggttgtcactggcatgggcgtagttacaccgttaggccat
gaccctgatgaattctacaataaccttctacagggtgtcagtggagtaagtgagatagag
gcgtttgattgctccagctatcccacgagaattgcaggagaaatcaaatcgttttcgaca
gatgggtgggttgcaccaaagctagctaagagaatggacaagttcatgcaatatttgata
acggctgggaaaaaagcattggaaaatgctggaatcactgaagaaatcatgaatgagttg
gaaaagtcaaggtgtggggttctcattgggtctgctatgggtggcatgaaggtttttagt
gatgcgattgaagcattaagggtttcatacaagaagatgaacccattttgtgtacctttt
gcaactacaaacatgggttctgcaatacttgctatggacctgggctggatgggcccaaat
tattctatctctactgcttgtgctactagcaacttctgcattctgaatgctgctaatcat
atcagaaaaggggaagcagatctgatgctttgtggtggttctgatgcaccgatcatccct
attggattgggaggttttgtggcctgcagagctctttcacagagaaacagtgatccaaca
agagcttctcggccttgggatgtggatcgtgatggatttgtaatgggagaagggtctggt
gtgcttgttctggaagaacttgagcatgcaaagcaaagaggtgcagaaatatatgctgaa
tttctgggaggaagcttcacatgtgatgcataccacatgacagagcctcatccagaaggg
agaggggttattctttgtattgaaaatgcactagcagattcaggagtaacaaaggaagac
atcaactatatcaatgcccatgcaacatctacacagatgggtgatttgaaggaatttgaa
gctctcacccgttgttttggccagaatcctcagttaagagtgaactcaacgaagtcaatg
acaggccatcttcttggagctgcaggtggaatagaagctgtcgctgctatacaagctata
agaacaggttgggtacatccaaatatcaatttggataatccggagaaaaatgtggatgtc
agcttgctggtgggtccccagaaggagagatgcgatgtcaaggtggcactgtcgaactca
tttggatttggtgggcacaactcgtcgattttgtttgcccccttcaaatga
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