Panicum virgatum (switchgrass): 120688103
Help
Entry
120688103 CDS
T07260
Name
(RefSeq) 3-hydroxyisobutyryl-CoA hydrolase 1-like
KO
K05605
3-hydroxyisobutyryl-CoA hydrolase [EC:
3.1.2.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00280
Valine, leucine and isoleucine degradation
pvir00410
beta-Alanine metabolism
pvir00640
Propanoate metabolism
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
120688103
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120688103
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
120688103
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.2 Thioester hydrolases
3.1.2.4 3-hydroxyisobutyryl-CoA hydrolase
120688103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECH_2
ECH_1
Motif
Other DBs
NCBI-GeneID:
120688103
NCBI-ProteinID:
XP_039826206
LinkDB
All DBs
Position
9N:50886597..50892823
Genome browser
AA seq
382 aa
AA seq
DB search
MASLPPGADSDQLLIEANGSTRTLILNRPKQLNALSSSMIMGLLRCFTAYEKDDGVKVLI
MKGKGRAFCAGGDVAAVVRDINNDTWKYGADFFRNEFLLNYIIATYSKPQVSLLAGIVMG
GGAGVSLHGRFRVATENTFFAMPETALGLFPDIGASYFLSRLPGFYGEYVALAGARLDGA
EMHACGLATHFVQLNRLPLLEESLKKVDTSNPFALCGIIDQFSHQPSLKENSSLNRLEMI
NKCFSKRTVEEIIYALEQETSNSADEWVAATIQSLKKASPTSLKISLRSIREGRTQTIGE
CLRREYRMVCHVMRGDFSRDFFEGCRAILLDKDRNPKWMPPRLEQVHDAAVEQYFSRIND
PQWEDLNLPARRSHGRNVESKL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctgcctcccggcgccgactccgaccagcttttgatagaagcaaatggctct
acacggacactgattttgaacaggccaaagcagctgaatgctctctcctcctcaatgatt
atgggactcttgaggtgtttcactgcttacgagaaagatgatggagttaaagtgttgatt
atgaaggggaaaggaagagcattttgtgctggaggtgatgttgctgctgttgtccgggat
ataaacaatgacacctggaaatacggtgctgatttcttccgaaatgaatttttgttaaac
tacatcatcgcaacttatagcaaacctcaggtttctcttcttgctggaattgttatgggg
ggaggtgctggtgtttctttacatggaaggtttcgagttgcgaccgaaaacacgtttttt
gcaatgccagagacagcattgggactctttccagatataggggcttcttattttctgtct
cggctacctggtttctatggagagtatgttgctcttgccggtgcaagattggatggtgca
gaaatgcatgcgtgtggtctggcaactcattttgtccagttaaataggctgccgttactg
gaggaatcgcttaaaaaggtggacacctccaatccttttgctttgtgtggtattattgat
caattttctcatcagccatcattgaaagaaaacagctctctgaataggctggaaatgatc
aacaaatgcttttccaaaagaacagttgaagaaatcatatatgctcttgaacaagaaact
tcaaattcggctgatgaatgggttgcagctacaatccagtccttgaaaaaggcctctcct
accagtctgaaaatctccctgagatcgataagagaagggagaactcaaactattggggag
tgcttacgtcgggaatatagaatggtctgccatgtcatgcgcggtgacttcagccgtgac
ttttttgagggatgcagggctatactgttagataaagatcgcaacccaaagtggatgcct
ccaaggttagaacaagtgcatgatgcagccgttgaacaatatttctccagaatcaatgac
ccacagtgggaagatttgaacctacctgccagacgttcccatggaagaaatgttgagtcc
aagctttga
DBGET
integrated database retrieval system
