Panicum virgatum (switchgrass): 120688143
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Entry
120688143 CDS
T07260
Name
(RefSeq) metacaspase-1-like
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120688143
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C14: caspase family
120688143
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Motif
Pfam:
Peptidase_C14
zf-LSD1
C1_1
Motif
Other DBs
NCBI-GeneID:
120688143
NCBI-ProteinID:
XP_039826250
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Position
9N:complement(51842048..51845626)
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AA seq
351 aa
AA seq
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MMMLINCSGCRTPLQLPHGAPCIRCAICGAVTHVAPAPHADPSRGAVQPAPGWGPPPPPA
HGRKRAVVCGISYRYSRHELKGCINDAKCMRHLLMTRFNFPDDSIIMLNEEQTDPYKIPT
KHNIRMAMYWLVQGCQPGDSLVFHYSGHGAQQRNYSGDEVDGFDETLCPLDFETQGMIVD
DEINTAIVRPLPHGVKLHALIDACHSGTALDLPFLCRMNRSGQYVWEDHRPRSGVWKGTS
GGEAISFSGCDDDQTSADTSALSKITSTGAMTFCFIQAIERGQGTTYGSILNSMRTTIRN
TGDSAGVGGGAATSLITMLLTGGSLSTGGLRQEPQLTACEPFDVYAKPFSL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgctgatcaactgctcggggtgccgcaccccgctgcagctgccgcacggggcg
ccctgcatccgctgcgccatctgcggggcagtcacgcacgtcgcccccgcccctcacgcc
gaccccagccgaggcgccgtgcagccggcgccggggtggggcccgcccccgccgccggcg
cacgggcggaagcgcgccgtggtgtgcgggatctcgtaccgctactcgcgccacgagctc
aagggctgcatcaacgacgccaagtgcatgcggcacctgctcatgacgcgcttcaacttc
cccgacgattcgatcatcatgctcaacgaagaacaaactgacccttacaaaatcccaacg
aagcataacataaggatggccatgtattggcttgtgcaaggttgtcagcctggagactca
ctggttttccattattctgggcatggagcacaacaaagaaactacagtggagatgaggtt
gatgggtttgatgaaactctctgcccattggattttgagacacaaggaatgattgtggat
gatgagataaatacggcaattgttagaccacttcctcatggagttaaacttcacgcactc
attgatgcttgtcatagtgggactgcacttgatttgccattcctctgcagaatgaacagg
agtggtcaatatgtctgggaagatcaccggccacgatcaggtgtctggaaaggcactagt
ggtggggaggctatttcatttagtggttgtgatgatgatcagacctctgcagatacttct
gctttgtcaaagatcacttcaactggtgcaatgacattctgcttcatccaagccattgaa
cgtggccagggcaccacctatggtagtatcctgaactctatgcgtacgacaatccgcaac
acaggcgactcagcaggtgttggtggcggtgccgctacatcactaattacaatgcttctt
acgggagggagcctttctactggtggtctgagacaggagccacagctgacagcgtgcgag
ccatttgatgtctacgcgaagcccttctcgctatga
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