Panicum virgatum (switchgrass): 120688145
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Entry
120688145 CDS
T07260
Name
(RefSeq) putative casein kinase II subunit beta-4
KO
K03115
casein kinase II subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
pvir03083
Polycomb repressive complex
pvir04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120688145
09126 Chromosome
03083 Polycomb repressive complex
120688145
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120688145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120688145
03036 Chromosome and associated proteins [BR:
pvir03036
]
120688145
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
90S particles
Kinase
120688145
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
120688145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CK_II_beta
Motif
Other DBs
NCBI-GeneID:
120688145
NCBI-ProteinID:
XP_039826253
LinkDB
All DBs
Position
9N:complement(51914306..51918590)
Genome browser
AA seq
363 aa
AA seq
DB search
MSFFAENPRYLSEFQPPPAHGHGLSSLPTSPRASSPLRSLSSLSISFPPPAQPANPSPQA
PTCEPRLPEVPWERRLELPRKDRKSGSSGALRGSWLLGGGGAGMDRKRIKDALEKHLEKS
SPSTSRGVAAKERERLGPGKLPASLGKAGKVSDGEEFESDSEDSDVSGSEGEDTSWIAWF
CSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTEEQNELIE
SSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDIPRSSTV
KIYCPKCEELHYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYTPRVFGFKLH
KKS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttttgcggagaacccccggtacctgtccgaatttcagccgccgcccgcccac
ggccacgggctctcttctctccccacctcgccccgcgcctcgtcacctctccgatctctc
tcttctctctccatctcgtttcccccgcctgcgcagccagcaaaccctagcccgcaagcg
cccacctgcgaaccccgactccccgaggttccctgggagcggaggttggagctgccgcgc
aaggatcgaaagagcgggagcagcggcgccttacgtggatcgtggttgctcggcggcggc
ggcgcggggatggaccggaagcgcatcaaggacgcgctcgagaagcacctcgagaagtcg
tcgccgtcgacctccaggggcgtcgcggccaaggagagggagcgccttggtcccgggaag
ctgccggcgtcgctcggcaaggccgggaaggtgtccgatggtgaggaattcgaatctgat
agtgaagattctgatgtcagtggttctgagggcgaggacacatcctggatcgcatggttc
tgtagcttgcgaggcaatgaattcttctgcgagattgacgatgattacatacaggatgat
ttcaacctgtgtggtttgagtaatcaagtgccatattatgattatgcacttgatctcatc
ttagacattgagtcttctaatggcgatgtgttcactgaggagcaaaatgaattgatcgaa
tcatctgcagagatgctgtatggattaattcatgcacgatacatcttaacaagcaagggt
ctagctgcaatgttggaaaagttcaagaactatgactttggtagatgccccagagtgtac
tgctgtggtcagccctgccttccagcaggacagtcagatattcctagatcgagcacagtg
aaaatatattgtccaaagtgtgaagaacttcactatccaagatccaagtaccaaggcaac
atagatggagcgtacttcgggacaacattccctcatcttttcctaatgacatacccacac
ttgaagccgcagaagccatcgcagcaatacaccccaagagtcttcggcttcaaactccac
aagaagtcatga
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