Panicum virgatum (switchgrass): 120688195
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Entry
120688195 CDS
T07260
Name
(RefSeq) autophagy-related protein 3-like
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120688195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120688195
04121 Ubiquitin system [BR:
pvir04121
]
120688195
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120688195
Membrane trafficking [BR:
pvir04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120688195
Ubiquitin system [BR:
pvir04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
120688195
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120688195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
DUF3097_N
Motif
Other DBs
NCBI-GeneID:
120688195
NCBI-ProteinID:
XP_039826317
LinkDB
All DBs
Position
9N:52806948..52812355
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AA seq
314 aa
AA seq
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MQVKHKVYELYKGTVERVTGPRTVSAFLEKGVLSVPEFILTGDNLVAKCPTWSWEAGDPS
KRKSYLPADKQFLVTRNVPCLRRAIKVEEEYDAAGAELVLDDDEDGEGWLATHGVQASKP
DEEEDIPSMDTLDIGKYDGIKSIPTYFSGGKKEEEEEDIPDMDTYEDTGDNLVAAEPSYF
VAEEPEDDNILRTRTYDVSITYDKYYQTPRIWLTGYDESRMPLKPELVLEDISKDHAGKT
VTIEDHPHLLAGKHASVHPCKHAAVMKKIIDVLMSRGGEPEVDKYLFIFLKFIASVIPTI
EYDYTMDFDLGSTS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgaagcacaaggtgtacgagctctacaagggcacggtggagcgggtcacgggc
ccgcgcaccgtctcagccttcctcgagaagggcgtcctctccgtacccgagttcatcctc
accggcgacaacctcgtcgccaagtgccccacctggtcctgggaagcgggcgacccaagc
aagcggaagtcgtatctccccgccgataagcagttcctcgtcacccgcaacgtgccttgt
ttaagacgtgccatcaaggtcgaagaagagtatgatgcagctggagccgagttggttctc
gatgatgatgaggacggtgaaggctggctcgcaacacatggcgtgcaagcatcaaagcca
gatgaggaggaagacataccctcaatggatacattggacatagggaaatatgatggaatc
aagtctattcccacctactttagcggtggtaagaaggaagaagaggaggaagatatacct
gacatggacacttatgaagacacaggggataatttggttgctgctgagccgtcatacttt
gtcgctgaagagcccgaagatgacaatattcttcgtaccagaacatatgatgttagcata
acgtatgacaaatactaccaaactccacgtatctggctgactggatatgatgagtcgaga
atgccactaaagcctgaacttgtgcttgaagatatcagcaaagaccatgcagggaaaacg
gtgactattgaagaccatcctcacttgttagcaggaaagcatgcttcggttcacccatgc
aagcatgcagctgtgatgaaaaagataattgatgttcttatgtctcgaggaggtgaacct
gaagttgacaagtaccttttcatatttttgaaattcatagcatcagtcataccaactatt
gagtatgattacacaatggactttgacctgggcagtacaagctga
DBGET
integrated database retrieval system