Panicum virgatum (switchgrass): 120688215
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Entry
120688215 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 42-like
KO
K26938
MATE family, citrate exporter
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120688215
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120688215
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Gene cluster
GFIT
Motif
Pfam:
MatE
DUF5478
Motif
Other DBs
NCBI-GeneID:
120688215
NCBI-ProteinID:
XP_039826344
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Position
9N:complement(21443050..21449601)
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AA seq
529 aa
AA seq
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MGDARRVREESLLDRSAGAAMEEAGGEHRRHHPLRVFFRDARLAFRWDELGREIMGIAVP
GALALMADPVASLVDTAFIGHIGPVELGAVGVSIAVFNQVSRIAIFPLVSVTTSFVAEED
AMSNGRDKDKINQENKHAVSDSEMVELISAEEASATTSKSSFETDSCEVSIEQKRKNIPS
VCTALLLGGVLGLLETLLLVLSAKPILGYMGVTPDSAMMKPALQYLVLRSLGAPAVLLSL
AMQGVFRGLKDTKTPLYATMAGDAINIVLDPIFMFVFQYGVKGAAIAHVISQYFIASILL
WRLWLRIDLFPPSLNHLQFGRFLKNGFLLLARVIAATCCVTLSASMAARLGSTPMAAFQI
CLQTWLACSLLADGLAFAGQAILASAFARKDYPKATATASRVLQLALVLGLLLSLLLGIG
LRIGSRLFTSDQGVLHHIYIGIPFVCLTQPINALAFVFDGINYGASDFGYAAYSMVLVAI
ISIICILTLASYSGFTGIWVALVIYMSLRMFAGFWRIGTARGPWVFLRS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgcccgccgcgtccgcgaggagagcctcctggaccgcagcgccggcgccgcc
atggaagaagcgggcggcgagcaccgccgccaccacccgctcagggtgttcttccgggac
gccaggctcgcgttcaggtgggacgagctcgggcgggagatcatggggatcgcggtgccc
ggcgcgctcgcgctcatggccgacccggtcgcttccctcgtcgacacggccttcattggc
cacataggtccagttgaacttggagctgtaggtgtatcaattgctgtgtttaatcaagtc
tcaagaattgcaatattcccccttgttagtgtcacaacatcatttgttgctgaggaggat
gctatgtccaatggcagagacaaagacaaaataaatcaagaaaataaacatgctgtttct
gatagtgaaatggtagagctgatttctgctgaagaggctagtgccactaccagcaaatca
tcttttgaaactgactcatgcgaggtcagtattgagcaaaagaggaaaaatattccatca
gtctgtacagcactattacttggtggggtgctcggcctacttgaaaccctacttcttgtt
ctctctgcaaaacctatcttaggttacatgggtgtaacaccggattctgctatgatgaag
cccgcattacaatacttggttctcagatctcttggtgctcctgctgttcttttatctttg
gcaatgcaaggagtctttcgtggacttaaggatacgaagacgcctctatatgcaactatg
gctggagatgctatcaatatagttttggacccaatatttatgtttgtgttccaatatggt
gtcaagggtgctgccattgctcatgttatatcacaatactttattgcatctatactctta
tggagattatggctccgtatagatttgttcccacccagcttgaatcacctgcagtttggt
cggtttcttaaaaatggttttttgttacttgcacgagttattgccgccacatgttgtgtg
acactatctgcatcaatggctgcacgactgggttcaactccaatggctgcattccagatc
tgcttgcagacctggttggcttgttcgcttcttgcagatggattagcttttgctggtcag
gctatacttgcaagcgcatttgctcgtaaggactatccaaaggctactgccaccgcttct
cgtgtcctgcagctggcattggtcttgggacttctcctaagtttacttcttggtattggt
ttgcgtataggatcaaggttatttacgagtgatcagggtgtactgcatcatatctacata
ggaataccatttgtctgtcttactcaaccaatcaacgctttggcttttgtatttgatgga
atcaactatggagcgtcagattttggatatgctgcctactcaatggtccttgtcgctatt
atcagtatcatttgcatactcacacttgcaagttatagtggctttactggaatttgggta
gctttggtaatctacatgagcctccggatgtttgctggattttggaggatagggactgca
cgaggtccatgggtttttcttcgcagctga
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