Panicum virgatum (switchgrass): 120688267
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Entry
120688267 CDS
T07260
Name
(RefSeq) CWF19-like protein 2 isoform X1
KO
K24940
CWF19-like protein 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120688267
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120688267
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
120688267
NCBI-ProteinID:
XP_039826444
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Position
9N:complement(8458180..8461880)
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AA seq
768 aa
AA seq
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MLSGVKLVPRDQILSGRKHGSGGGSDSDSSGGMRRAKRSKGGRDKREKGNRRRKHRRRYS
SKGESGSDTDDSIGEEEEADVSRSKRRGKHRRESSESGSGRARGKGKQICDGEDDEDDDD
TGGEGLRASEVVRREMGLEWMLKSASSSRAEGSSVRKVDNDEKDDAAHEEIARPNPKELN
PYLKDNGTGYPEESTPSNAGNQLLASSVVGDGGASWRLKALKRAKEQAAREGRKLEEVVE
ERWGSLGDLAVSVSASRAAHSHAHLHAIRGRKSGNADNVEEHTKGTPEGRQGGDSVRREY
LQDVSSQRHAMRKPKPDSVPWKRRRQNISSEDQELISSAVASLNKFSDDGSFMEKISNLN
KNTHVSTTSASATADEQRDNEQKHFKKSSQKAPLVSTQKLNTNQLAAKILQLRMKGKTEE
AEQLSSSVVSSNMAEHVLILCQREMEALLENQDTVTEERSHGKGRSSIRDTLKPSAADCR
RREENADLHLANKIMHNKQYSMSKSIEDEYDFGDAPSKKDKRKNKGAHEERRITNRHMST
QKERCLYCFENPSRPKHLVVAIGNFTYLMLPQFEPVVPGHCIILPLQHESATRTVDQNVW
GEIRNFKKCLLKMFAQQDKDVVFMETVISLSRQRRHCMIECIPVPCDVSSNAPMYFKKAI
DEAEEEWTQHEMKKVIPTSASRNLRQAIPENFAYFHVEFGLDRGFVHVIDDESKFSAGFG
LNVIRGMLQLPEEDMHRRRRHESMDNQKQAVASFMKDWEPFDWTKQLD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgctctccggcgtcaagctagtcccgcgcgaccaaatcctttcgggtcggaagcacgga
agcggcggcggctccgattccgactcctccggcggcatgaggcgggcgaagcggagtaaa
ggtggccgggacaagagggagaagggcaaccggcggaggaaacaccgccggcggtacagc
tcgaagggtgagtcggggtcagataccgatgattccatcggcgaggaagaggaggcggat
gtcagtcgaagcaagcgccgagggaagcaccggagggaatccagcgaatctggcagtggg
agagcaaggggcaaggggaagcagatatgtgatggtgaggatgatgaggacgatgatgat
actggtggtgaggggttgagggcaagcgaagtggttaggagggagatggggcttgaatgg
atgctcaagtcggcaagcagcagtcgagccgagggcagcagcgtccgtaaggttgataat
gatgagaaggatgacgctgcacatgaagagattgccaggccaaaccctaaggaacttaac
ccatacctgaaagataatggaactggctacccagaagaatctaccccatccaatgctggc
aatcagttgcttgcttcctctgttgtgggggatgggggtgctagttggaggcttaaggct
ttgaagcgtgctaaggagcaagctgctcgtgaaggaagaaagcttgaggaggttgttgaa
gagagatggggctcgttaggcgacttagctgtgtcagtatcagcatcaagagctgcccat
tcacatgctcacttgcatgccattagaggaagaaaatctgggaatgctgacaatgtagaa
gaacacaccaaaggaactccggagggtcgccaaggtggtgacagtgtcaggcgtgaatat
ttacaagatgtctcttctcaacgccatgccatgagaaaacctaaaccggattcagtaccg
tggaaaaggagaagacagaatatatcttctgaggaccaggagcttatctcttcagcagta
gcaagcctgaataagttttctgatgatggaagctttatggaaaagattagcaatcttaac
aagaacacacatgtctcaactactagtgctagtgctactgctgatgaacagagggacaat
gagcagaagcattttaagaagagttcacagaaagcaccattagtgagcactcagaaatta
aatacaaatcagttggctgcaaagattctgcagctccgaatgaaaggcaagacagaagaa
gctgaacaactttcatcttctgtagttagtagcaatatggcggaacatgttctcattctt
tgtcagagggaaatggaagctttgctggagaatcaggatactgtcactgaggaacgtagt
catggaaaaggaaggagctcaatcagggatacattgaagcctagtgcagctgattgcagg
agaagagaagagaatgcagacctgcatttggctaataagattatgcacaataagcagtac
agtatgtctaaaagtatagaggatgaatatgattttggtgatgctcctagtaaaaaagac
aagagaaagaataaaggggcacatgaggagaggagaatcactaatagacatatgtcgact
cagaaggagcgctgtttgtattgctttgagaacccatccaggccaaaacatctagttgtt
gctattggaaacttcacttacttgatgctgccgcagtttgagcccgttgtccctgggcat
tgtattattctcccattacaacatgagtctgcaacgagaaccgttgatcagaatgtttgg
ggggagattcgcaacttcaagaagtgcctactgaagatgtttgcacagcaggacaaggat
gtagtgtttatggagactgtcataagcctgtccagacaaaggagacattgcatgattgag
tgtatccctgtcccttgtgatgtttcaagcaacgccccaatgtacttcaaaaaggcgatt
gatgaagctgaagaagaatggacccaacatgagatgaagaaggttatcccgacaagcgca
agccgcaacttgaggcaagccatcccggagaattttgcctatttccatgtggagtttggg
ctggaccgtggttttgttcatgtaatagatgatgagagcaagttcagcgctggatttgga
ttgaatgtcatcagagggatgctccagttgccagaggaggacatgcaccgtcgcagaagg
catgagtccatggataaccagaagcaagctgttgctagcttcatgaaggactgggagccc
ttcgattggacgaagcagcttgattag
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