Panicum virgatum (switchgrass): 120688293
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Entry
120688293 CDS
T07260
Name
(RefSeq) calmodulin-binding transcription activator CBT-like
KO
K21596
calmodulin-binding transcription activator
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120688293
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
Others
120688293
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
IQ
Ank
Ank_4
Ank_3
Motif
Other DBs
NCBI-GeneID:
120688293
NCBI-ProteinID:
XP_039826484
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Position
2K:complement(56688819..56702389)
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AA seq
954 aa
AA seq
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MTFLAIFSSLLPPPRRLLPSPHGESERQTRRRRVWKQQLSAAMAGGAGARDPLVASEIHG
FLTFADLNFDKLLAEAGTRWFRPNEIYAVLANHARFKVHAQPIDKPASGTVVLYDRKVVR
NFRKDGHNWKKKKDGKTVQEAHEKLKIGNEEKVHVYYARGEEDPNFFRRCYWLLDKELER
IVLVHYRQTSEENAIPPPHIEAEVAEVPPINIIHYTSPLTSTDSASARTELSSCAAAAPE
EINSHGGRAISCETDDHDSSLESFWVDLLESSMKNDTSVRGGSLTPNQQTNYGMRDSGNN
ILNTNATSNAIFSSPDNVVSEAYAANPSLNQVSESYYGALKHQVNQSPSLLTSDLDSQSK
PLANSIMKTPVDGNMPSDVPTRQNSLGLWKYLDDDISCLMNNPSSAVPITRSVIDEMPFH
IIEISSEWAYCTDDTKVLMVGYFLDNYKHLAGANLYCVIGEQCVTADTIQTGVYRFMARP
HVPGRVNLYLTLDGKTPISEVLSFEYRTMPGSSDNDEPKKSKLHMQMRLARLLFSTSQKK
IAPKFLVEGSRVSNLLSASTEKEWIELFKCITDSKGTNIPATESLLELVLRNKLQEWLVE
KIIEGHKSTDRDDLGQGPIHLCSILGYTWAILLFSLSGLSLDFRDSSGWTALHWAAYYGR
EKMVAALLSAGANPSLVTDPTHDDPGGLTAADLAARQGFDGLAAYLAEKALTAHFEAMSL
SKDKRSTSRTQSIKQISKEFENLTEQELCLRESLAAYRNAADAASNIQAALRERTLKLQT
KAIQSANPEIEAATIVAAMRIQHAFRNYNRKKMMRAAARIQSHFRTWQMRRNFMDMRRQA
IKIQAAYRGHQVRRQYRKVIWSVGVVEKAILRWRKKRKGLRGIATGMPVAMSTDTEAAST
VEEDYYQVGRQQAEDRFNRSVVRVQALFRSHRAQQEYRRMKVAHEEAKVEFSQQ
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacttttctcgcgattttctcaagtctacttcctcctcctcgtcgtcttctccccagt
ccccacggtgagagcgagagacaaacgcgcaggaggagagtgtggaagcagcagctgagc
gcggccatggcgggcggcgccggcgcgcgggacccgctcgtcgcctccgagatccacggc
ttcctcaccttcgcagacttgaactttgacaagctgctggctgaggccggaacacgctgg
ttccggccgaatgagatctatgcagtgctggcgaaccatgccaggttcaaggtccatgca
cagcccatcgacaagcccgcgagtggtactgttgttctgtatgatcgtaaagttgtccga
aacttccgtaaagatggccataattggaagaaaaagaaggatggcaagactgtccaagaa
gcccatgaaaaattaaagattggtaatgaagaaaaggttcatgtgtattatgctcgagga
gaggaagatccaaatttctttcgtagatgctactggctgcttgacaaagagttggagcgc
atagttcttgtgcattatcgtcaaacatctgaggaaaatgccataccaccaccacatata
gaagctgaagttgcagaagtgcctccaatcaatattattcattatacctctcctctaaca
tcaacagattctgcctctgctcgtactgagctatcttcttgtgcagctgctgcaccagaa
gaaattaactcacatggtggcagagcgatttcttgtgaaacagatgatcatgattctagc
ctcgaatcattctgggtagatctattggagtcatctatgaagaatgatacttctgtccgt
ggtggatctttgacacccaatcagcagactaattatgggatgagggattctggaaataat
atcttgaataccaatgccacaagtaatgctatcttttcttcaccagataatgtagtttca
gaagcttatgctgccaatcctagcctcaatcaagtatcagagagttactatggagctctg
aaacatcaagtgaaccaatctccatcccttttaacgtcagatctggattctcaatcaaag
cctcttgcaaattctattatgaagactccagtggatggtaacatgcctagtgatgtgcct
actaggcagaacagtcttggactgtggaagtacttggatgatgatattagttgtttaatg
aataatccaagctcagccgtacccatcactcgatcagtgattgacgaaatgccatttcac
atcattgagatctcctcagaatgggcttattgtacagacgatacaaaggtcctcatggtt
ggatacttccttgacaactacaaacatctggctggggccaatctatactgtgttattggt
gagcaatgtgttaccgcagacactatccaaactggagtttaccgtttcatggctagacca
catgtgcctggacgagtgaatctttatttgactttggatgggaaaactccaattagcgag
gttttgagttttgagtaccgtacgatgcctggcagctcagataatgatgaacccaaaaag
tcgaagcttcatatgcagatgagactagctcgcttgttgttctctacaagccagaaaaag
atagcaccaaagttccttgtagaaggtagcagagtttccaatctcttatcagcatcgaca
gagaaagaatggattgaattgttcaaatgcattactgattctaaaggcactaacattcct
gctactgagagcttgcttgaacttgtgttgcgaaataaattacaagagtggcttgtggaa
aaaataattgaaggacataagtcaacagaccgtgacgatctaggacaaggacctatacat
ctgtgttctatcttgggctatacctgggccattctcttattttctttgtcaggattatcc
ttggattttcgtgattcttctggttggacagctctgcactgggccgcatactatgggagg
gaaaaaatggttgctgctcttttgtctgctggagcaaatccgagcttggttacagatcct
actcatgatgaccctggtggactcactgctgctgatctagctgcaagacaaggttttgat
ggcttagctgcatatcttgctgagaaagcgttgactgctcattttgaagccatgtcacta
tccaaggataagagatcaacatcaaggacacagtcaataaaacaaatttccaaggaattt
gaaaaccttactgaacaagaattgtgcttacgagaatctttagcagcctaccgtaatgct
gctgatgctgccagcaatatccaagctgctcttagggaacgaactcttaagcttcaaaca
aaagcaattcagtcggccaatcctgagattgaagcggctacgatagttgctgctatgagg
attcagcatgcattccggaactacaacagaaagaaaatgatgcgagctgccgcacgaata
caaagtcatttccgaacatggcagatgaggaggaacttcatggacatgcgaagacaagct
ataaaaatacaagctgcataccgaggtcaccaagtgagaaggcagtaccgcaaggtaata
tggtccgttggagtcgtggagaaagctatcttgcgatggaggaagaagagaaaaggcctg
cgtggcattgcaactggaatgccagtagcaatgtctacagatacagaagcagcaagcact
gtagaggaggattactatcaggttggccggcaacaagctgaggacaggtttaacagatca
gtggtacgtgtccaagctctgttccgttctcatcgggcacaacaggagtaccggaggatg
aaggttgctcatgaggaggccaaggtggagttcagtcaacaatag
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