Panicum virgatum (switchgrass): 120688395
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Entry
120688395 CDS
T07260
Name
(RefSeq) cation/calcium exchanger 1-like
KO
K13754
solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120688395
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
120688395
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
120688395
NCBI-ProteinID:
XP_039826643
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Position
9N:complement(27392799..27394742)
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AA seq
554 aa
AA seq
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MARPPRVCGGVALVALLLATSGLSRGADVISSSSLADEARCDGYPAAGSAADPGRNPRGG
YVDYLDIFYCVLGGSRRPALGYAAMAAWLAVLFYLLADTAAVYFCSSLEGLARLLGLPPA
IAGATLLSLGNGAPDALSALASFAAGGGGAAAVGLSGVLGGAMFVSAAVLGAVSLRVGGQ
GVAVDRTSFFRDAGFLLLALAAVAVVLAAGEVNIWGAVVFASLYLVYVLAVAFTPDRWTR
RQDEEEDHAHAAAASSELHSVAETKFYTDHEAQDSLLSDTAPLLQYYTGDNDGRAGGNRS
AFWTVMNALALPLSLPRRLTIPDASKERWSKPTAVTAATLAPIFLSILWSHRATGGNPFP
SVLLGGLAGIALGLLAFVTTDPSAPPSRFLAAWFAGGFAMSVAWAYVIANEVLSLLVSAG
TVLSVDAAMLGVTVLAWGNSLGDLIADVAVASRGGPGGAQVAVSGCYGGPVFNVLMGLGL
SMLLSCWAGYPQPMKIPREPGLYRTLGFVVAGLSWALVMLPRRGMRVDRTLGFGLLAIYF
CFVCINISQLKNEG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacctccgcgtgtctgcggcggcgtcgccctcgtcgcgctcctgctcgccacc
tccggcctctcgcgcggcgccgatgtcatctcgtcctcctcgctggccgacgaggcgcgc
tgcgacgggtaccccgcggccgggtctgctgctgatcctggccgcaacccacgcggcggg
tacgtcgactacctggacatcttctactgcgtcctcggcggcagccgccgccccgcgctg
ggctacgccgcgatggcggcgtggctcgccgtgctcttctaccttctcgccgacacggcg
gcggtctacttctgctccagcctcgagggcctcgcgcgcctgctcggtctgccgccggcc
atcgccggggccacgctgctctcgctcgggaacggcgcgcccgacgcgctctccgcgctc
gcgtccttcgccgccgggggcggaggggccgccgccgtcgggctcagcggcgtgctcggc
ggcgcgatgtttgtgtccgccgccgtgctcggcgctgtctccctccgcgtcggcggccag
ggggtcgccgtcgaccgcaccagcttcttccgggacgcgggcttcctcctcctggccctc
gccgccgtggccgtcgtcctcgccgcgggcgaggtcaacatctggggcgccgtggtgttc
gcctcgctctacctcgtctacgtcctcgccgtcgccttcacccccgaccgctggacgaga
cgccaggatgaagaggaggaccacgcccacgccgccgccgcctcctcggagctccatagc
gtcgcagagaccaagttctacaccgaccacgaggcacaagactcgctcctctctgacacc
gcgcctctcctccagtactacaccggcgacaacgacggccgcgccggggggaacaggagc
gcgttctggaccgtcatgaacgcgctagcgcttcccctttctctcccccggcggctgacg
atcccggacgcgagcaaggagcggtggagcaagccgaccgcggtgaccgcggccacgctc
gccccaatcttcctgtccatcctctggagccaccgtgccactggggggaacccgttccct
tctgtcctcctcggcggcctcgctggcatcgcactgggcctcctcgccttcgtcaccacg
gacccctccgccccgccatcccggttcctcgccgcgtggttcgccggcgggttcgccatg
agcgtggcgtgggcgtacgtgatcgccaacgaggtcctctccctgctggtctcggccggc
accgtcctgtccgtggacgccgcgatgctgggggtgaccgtgctggcctggggaaactcg
ctcggcgacctcatcgcggacgtggcggtggcctcccgcggcggccccggcggcgcgcag
gtggccgtgtccggctgctacggcgggccggtgttcaacgtcctcatgggcctgggccta
tccatgctgctgtcgtgctgggccgggtacccgcagccaatgaagattccgagggagcct
gggctctaccggacgctgggctttgtggttgctggactttcgtgggccctggtgatgctg
ccccggagagggatgagggtggacaggacgctgggctttgggctcctggcgatatatttt
tgcttcgtctgtattaatatctcacagctcaagaatgaagggtaa
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