Panicum virgatum (switchgrass): 120688468
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Entry
120688468 CDS
T07260
Name
(RefSeq) chaperone protein dnaJ 13-like isoform X1
KO
K09531
DnaJ homolog subfamily C member 11
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120688468
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120688468
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Gene cluster
GFIT
Motif
Pfam:
DnaJ-like_C11_C
DNAJC11_beta-barrel
DnaJ
Laminin_I
Microp_apicomplexa_21
Motif
Other DBs
NCBI-GeneID:
120688468
NCBI-ProteinID:
XP_039826736
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Position
9N:20757563..20769726
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AA seq
541 aa
AA seq
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MASTPEPEDGRELYALLHLSPDASDEEIRRAYRQFAQIYHPDKYQDPQMKEVATENFQRI
RDAYEILSDENKRQIYDIYGMEGLNSGLELGPKLTKPEEIREQLERLRRRKEEEKFLVHA
RPNGSIIANFSVPQYLDGDGIMKGMGMSSEVELPVSKQNTVIVGGNLVVNGSAGTGAAST
VLRHQLSSVSHIDFMATAGLRSVIGMQTFRQISPHSTATSGLAVSLRDGSINLSNAWTRQ
LSENAVGNIQLVLGDDSSISVGWQKKDEKSTATGEIKFGTNFFGASAHYIHRFSSKSHAR
IAGRVGSTALDFEIGGGRQVSEFSTVRMMYNIGIQGVSWRFELHRAGQKLIIPVLLSTDL
NALFVTSAFAIPSTLYFLLQTYVVKPYYLKREKQKTLEKMEGLSTQLTEARKAAKKAQKL
LEPVSNRKKNRQLENNGLVITKALYGNHKKIKESSELNEINDDVASQVFDVTIPLNFLVT
EADQLKQLHEGIKKSGIMGFYDPCPGDPKLLLVEYTFHGRKYKVMVDDYEALLIPQDIHQ
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgccggagccggaggacgggagggagctctacgcgctgctccacctctcg
ccggacgcctccgacgaggaaatccgcagggcgtaccgccagttcgcgcaaatctaccac
cccgacaagtaccaggacccccagatgaaggaagtagcaactgaaaatttccaacgaata
cgcgatgcatatgagatactatccgatgagaacaaaagacagatttatgacatctatggt
atggaaggtttaaattctggcctggaacttggtcccaaactaactaaaccagaggaaatt
agagaacagttggaacgactgcggcggcgcaaggaggaagaaaaatttctcgttcatgct
cgacccaatggctcaatcattgctaatttctcggtgccacaatatttagacggtgatggc
atcatgaaaggaatgggaatgtctagtgaagttgagttgccagtgtccaagcaaaatact
gtcattgttggcgggaatttggttgtcaatggctcagctggaactggagcagcaagcact
gtgctgcggcaccagttatcttctgtttcccatattgattttatggcaacagctggacta
cgctctgttattggcatgcagacatttcgtcaaatttcaccacattctacagcaacttct
ggacttgctgtttctttaagagatggatctatcaacctgtcaaatgcttggactcgccaa
ctatctgaaaatgctgttgggaatatacagctagtccttggtgatgattcaagtatttct
gttggatggcaaaagaaggatgaaaaaagtactgcaacaggagaaataaagtttggaact
aatttctttggtgcatctgctcattacatccatcgcttctcctccaagtctcatgctcgc
attgctggtagagttggaagcacggcccttgattttgaaattggaggagggaggcaggta
tcagaatttagtactgtaaggatgatgtataacataggaattcagggtgtctcttggaga
tttgagttacatcgtgctggtcaaaagttaattatcccagtcttgctttcgactgattta
aacgcattatttgttaccagtgcatttgctattccttcaacactatattttctgcttcag
acatatgttgtaaagccttactaccttaagcgagaaaagcagaagacgcttgaaaagatg
gaaggcttatctacacagctaactgaagccagaaaggcagctaaaaaagctcaaaaattg
ctggaacctgtctccaaccgtaagaagaatagacagctagagaacaatgggttggtgatt
actaaggctctgtatggtaatcacaaaaaaatcaaagagagcagtgaattgaatgaaata
aatgatgacgtcgcttcacaagtatttgatgtgaccatcccactgaacttcctcgttacc
gaggctgaccagctcaagcagcttcacgaggggataaagaagtctggaataatgggcttc
tacgatccttgtcctggagatccgaagctgttacttgttgagtacacatttcatggtcgg
aaatacaaggtcatggtggatgactatgaggcgctgttgataccacaagatatccatcaa
ttttga
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