Panicum virgatum (switchgrass): 120688494
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Entry
120688494 CDS
T07260
Name
(RefSeq) callose synthase 9-like isoform X1
KO
K11000
callose synthase [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120688494
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120688494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glucan_synthase
FKS1_dom1
Motif
Other DBs
NCBI-GeneID:
120688494
NCBI-ProteinID:
XP_039826768
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All DBs
Position
9N:complement(81258064..81299629)
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AA seq
1909 aa
AA seq
DB search
MSRAEANWERLVRAALRGERFAGVYGQPVTGIAGNVPSSLGNNVHIEEVLRAADEIQDED
PTVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIRQKLAKREGGAIDRSQDIAKLQ
EFYKLYREKHKVDELIEDEMKLRESAVFSGNLGELERKTLKRKKVLATLKVLWSVIEDMT
KDISPEDAQNLISEEMKKVMQKDAARTEDVVPYNIIPLDALSSTTNAIVTFPEVRAAIST
LQYHRDLPRLPDTFSVPDARNSDMLDLLQCIFGFQEGNVKNQREHIVHLLANEQSRVGKP
SGNEPKIDEGAVHAVFSKALDNYIKWCSYLPLRPVWNNSESLTKEKKLLYVCLYYLMWGE
AANVRFLPEGLCYIFHHLARELEEILQKQTAELAESCNSNGSLSFLENVISPLYDIIAAE
AANNKNGRAPHSAWRNYDDFNEFFWSLKCFHLGWPWRLDNPFFSKPSKKEKGMFGRGHHY
GKTSFVEHRTFLHLYHSFHRLWMFLIMMFQGLTIIAFNNGSFDMKTVLRLLSLGPTYVAM
KFIESLLDILMMYGAYSTSRGSAITRVLWRFCWFTVASLTICYLYVKALQDGTQSATFKI
YVFVISAYAGVKIIMSLLMSVPCCHGLTEACYRWSAVRLVKWMHQENNYVGRGMHESPLD
YIKYVAFWIAILGAKFSFTYFLQIKPLVKPTRAVINFKGLQYAWHDFVSKNNHNAITILS
LWAPVVSIYLLDIHVFYTVMSAIYGFLLGARDRLGEISSVEAVHRFFEKFPGAFMDKLHV
AVPKRKQLLSSSQLTELNKFDASRFAPFWNEIVRNLREEDYISNAELELLLMPKNDGVLP
NVQWPLFLLASKVFLAKDIAADCKDSQEELWLKISKDEYMQYAVVECFHSVYHILTSILE
KEGRLWVERIYGGIHESISKKNIQSDLHFSKLHIVIAKLVAVLGILRGTTESSDMKKGAV
NAIQDLYEVVHHEVFSIDMRDHLDEWTQINRARAEGRLFNNLKWPNDPVLKDLIKRLYSL
LTIKESAASVPKNLEARRRLQFFTNSLFMQMPVARPASEMFSFSVFTPYYSEIVLYSMNE
LQKKNEDGITTLFYLQKIYPDEWKNFLTRINRDENAADSELFGNPNDILELRLWASYRGQ
TLARTVRGMMYYRKALMLQSYLERIQSEDRESTFALAGSADTHFELSPEARAQADLKFTY
VVTCQIYGKQKGEGKPEAADIALLMQRNEALRVAYIDEVESIESIKNGKPSTKYYSKLVK
ADVHGKDKEIYSIKLPGNPKLGEGKPENQNHAIIFTRGNAVQTIDMNQDNYFEEALKMRN
LLEEFSLKRGKHYPSILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHY
GHPDVFDRIFHITRGGISKASRSINISEDIYAGFNSTLRQGSITHHEYIQVGKGRDVGLN
QIAVFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFYVTTVGFYFCTMLTVLTVYIFLY
GKTYLALSGVGESIQNRADILQNTALNAALNTQFLFQIGVFTAVPMILGFILESGVLTAF
VQFITMQFQLCSVFFTFSLGTRTHYFGRAILHGGAMYRATGRGFVVRHIKFAENYRLYSR
SHFVKGMEVALLLVIFLAYGFNNAGAVGYILLSISSWFMVLSWLFAPYLFNPSGFEWQKI
VEDFRDWTNWLFYRGGIGVKGEESWEAWWEEELQHIYTIRGRILETILSLRFFIFQYGVV
YHMDASNDSTALLVYWISWAVLGGLLVLLLVFGLNPKAMVHFQLFLRLVKSIALLMVLAG
LIVAIVFTNLSVIDVFASILAFAPTGWGILSIAVAWKPIVKKLGLWKTIRSLARLYDAGM
GMIIFVPIAICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAGM
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggcggaggccaactgggagcggctggtgcgggcggcgctgcgcggggagcgg
ttcgctggcgtctacgggcagccggtcaccggcatcgccgggaacgtgccgtcgtcgctc
ggcaacaacgtgcacatcgaggaggtgctccgcgccgccgacgagatccaggatgaggac
cccaccgtcgcgaggattctttgtgagcatgcttactcacttgcccagaatttggatcct
aatagtgaaggacggggagtattgcagttcaaaacaggtttgatgtcggtaatcaggcaa
aaattagcgaagagggaaggtggtgctatagaccggagtcaggatattgctaaactgcaa
gaattttacaagctttacagagaaaagcataaagttgacgagttgattgaagatgaaatg
aagttgagggaatcagctgtattcagcggtaaccttggagagttggaaaggaaaactctg
aagcggaaaaaagtacttgcgacgttgaaggtcttatggtcagtaatagaggatatgaca
aaggatatttcaccagaagatgcacaaaatttgatatctgaagagatgaaaaaggtcatg
caaaaggatgcagcaaggacagaggatgttgttccatataatattattcctctagatgca
ttgtcttctaccactaatgcaattgtgactttcccggaggtgagggcggcaatatcaact
cttcagtatcatagggatcttcccaggctccctgatacattttcagtacctgatgctagg
aattcagatatgctggatctattgcaatgtatatttggtttccaggaaggtaatgtgaaa
aaccaaagggagcatatcgttcacctattggcaaatgaacagtctcgtgtgggcaaacca
tctgggaatgaaccgaaaattgatgagggtgctgtgcatgctgtgttctccaaagcccta
gataactatatcaaatggtgcagctatctgcctcttcgtcctgtctggaataacagtgaa
tctttgacgaaagaaaagaagttgctatatgtgtgtttatactacttgatgtggggtgaa
gctgccaatgtacgatttcttccagagggcttatgctacatatttcatcatctagcaaga
gaactagaggagattctgcaaaaacaaactgcagagcttgctgaaagctgcaattctaat
ggcagcttgtcatttcttgaaaatgtcatttctcctttgtatgatatcattgcagcggaa
gcggccaataataagaatgggcgtgcaccacattctgcatggagaaattatgatgatttc
aatgagtttttctggtctcttaagtgctttcacctagggtggccgtggaggctggacaac
ccgtttttctcaaagcccagtaaaaaggagaagggcatgtttggtaggggccatcactat
ggaaagacatcttttgtggaacataggacttttcttcatctttatcacagctttcatcgc
ctttggatgttcctaattatgatgtttcagggactaactatcattgcttttaacaatggt
agttttgacatgaagactgtattgcgacttcttagtctgggcccaacttatgtcgcaatg
aaatttattgagagtctattggacattctaatgatgtatggtgcgtattcaacttctcgt
ggatctgcaatcaccagagtgctttggcgattctgctggtttactgtagcttcattgacg
atctgttacctatatgtcaaggcacttcaagatgggacacagtcagcaacattcaagata
tatgtttttgtaatcagtgcatatgcgggtgttaagattattatgagcctccttatgagc
gtcccttgttgccatggtttgactgaggcttgctaccgttggtctgctgtacgccttgtt
aaatggatgcatcaggagaacaattatgttggaagaggcatgcatgagagcccccttgac
tatatcaaatacgttgctttctggattgcaattcttggtgcaaaattttcattcacctat
tttcttcagataaaacctcttgtgaaaccaacaagagctgtaatcaatttcaaaggcttg
cagtatgcctggcatgactttgtttcaaaaaataaccataatgctattacaatcctttct
ttatgggctccagtggtgtcaatttaccttttggacatccatgtattttacactgttatg
tctgctatttatggatttctccttggtgcgcgcgatcgcttgggagagattagttctgtt
gaagcagttcacagattctttgagaagttccctggagcattcatggacaaacttcatgtt
gctgttccaaaaaggaaacaactgctatcttccagtcagcttacagagttgaacaagttt
gatgcatctagattcgcccccttctggaatgaaattgtgaggaatttaagggaagaagat
tatattagcaatgctgaattagaattgcttttgatgcccaagaatgatggagttcttcca
aatgtgcagtggccacttttcttgcttgctagcaaggttttcttagctaaagatatcgca
gctgactgtaaagactcacaagaagaactttggctgaaaatatcaaaggatgaatacatg
caatatgctgttgtagagtgcttccatagcgtttatcatattctgacttcgatactagag
aaagaaggacgtctctgggtggagagaatttatggtggtatccatgaaagcatttcaaag
aagaacatccaaagtgatcttcatttctccaaattgcatattgttattgccaagcttgtt
gctgtccttggaatactgaggggtaccacagagtcaagtgatatgaaaaagggagcagtt
aatgctattcaggacctatatgaagttgttcaccatgaagtgttttccattgatatgagg
gatcaccttgatgagtggactcagataaatagagcaagagctgaaggccgcctcttcaat
aatcttaagtggccaaatgatcctgtattgaaggacttgatcaagcgattgtattcactt
ctgacaatcaaagaatcagctgcaagtgttcctaaaaatttggaagccaggcggagactt
cagttctttacgaactctctgtttatgcaaatgcctgttgcaaggcctgcttcagaaatg
ttttcctttagtgtgtttactccatattactccgagattgttctctacagcatgaatgaa
cttcagaagaaaaacgaagatggtataactacactgttttatctgcagaagatataccca
gatgaatggaagaatttccttactcgtatcaacagggatgaaaatgcagcagattctgaa
ctttttggcaacccaaatgacatacttgaactacgtctgtgggcttcttatcgtgggcag
accttggcacgaactgttcgtggtatgatgtactatagaaaagcccttatgctgcagagt
tatttggagaggatacaatctgaagatcgtgaatctacatttgctttggccggttcagct
gatacacattttgagttgtctcctgaggcgcgtgcgcaggctgatttgaagtttacctat
gtggtcacctgccaaatttatggaaaacagaagggagaaggcaagcccgaagctgcagat
atagccctactaatgcaaaggaatgaagctcttagagttgcttacatcgacgaagttgag
agcattgagagcattaagaacggaaagcccagcactaagtattactcaaagcttgttaaa
gctgatgttcatgggaaggataaggaaatttattccattaaattgcctggcaacccaaag
cttggggaggggaaacccgaaaaccaaaatcatgccataatattcactcgtggaaatgca
gtacaaactattgatatgaatcaggacaattacttcgaggaggcacttaaaatgagaaac
ctgctcgaggagttctctctgaagcgtggcaagcattacccttctattcttggtgttcga
gagcatgtcttcacgggaagtgtttcctccctggcctcatttatgtctaatcaggaaact
agtttcgtgactttaggacagcgtgttcttgctaacccactgaaagtgagaatgcattat
ggccatccagatgtttttgatagaatttttcatataacaaggggtggaatcagtaaggcc
tcacgaagcattaatatcagtgaggatatatatgcaggattcaactcaactctgcgtcaa
ggcagcataactcatcatgagtatattcaggtgggcaaaggtagggatgttggacttaat
cagattgcagtatttgaaggaaaagttgctggaggaaacggtgaacaagttcttagccga
gacatatatagactcggacagctttttgacttcttcaggatgttatccttctacgtgaca
actgttggattctacttctgtactatgcttaccgtgctgactgtgtacatatttctctat
gggaaaacatatctggccttatctggtgttggagaatcgattcaaaacagagctgatata
ttgcagaacacagctttgaatgctgctctgaacactcaatttcttttccagattggtgtg
tttactgcagttcccatgattcttggtttcatccttgaatcaggtgtcttaacggctttt
gtccaatttatcacaatgcagttccaactatgttctgtatttttcactttctcacttgga
acgaggactcattactttggccgcgcaatattacatggaggtgcaatgtatagagcaact
ggcaggggttttgtggtacgtcacatcaagtttgctgagaactatcgcctttattcacga
agccactttgtgaaagggatggaggttgcgcttttgttggtgatctttctagcatatggt
ttcaacaatgctggagcagttggctatattttactctctataagcagttggtttatggtg
ctgtcttggctttttgctccctacttatttaacccatctggttttgaatggcagaagatc
gtcgaggatttcagagactggacaaattggctgttttatcgaggtggtattggtgtcaaa
ggagaagaaagctgggaagcttggtgggaagaagaactgcaacatatttacaccatcaga
gggaggatactggaaactatactaagcctaaggtttttcatcttccaatatggagttgtt
taccacatggatgcaagcaatgacagtacagcgttattggtgtattggatttcttgggct
gtgcttggtggccttcttgtcctcctcttggtctttggtttaaaccccaaggccatggta
cattttcaattgttcctgcgtctggtcaagagcatagcactcttgatggttttggctggt
ttgattgtggctattgtgtttacgaacctcagtgtcatagatgtatttgcttccattcta
gcatttgcgccaactgggtggggaattctttcgattgccgtggcatggaaaccgatcgtg
aagaaattaggtttgtggaagacaatacgctccctagcccgcctctacgatgctggaatg
gggatgatcatttttgttcccatagcgatctgctcgtggtttccattcatatctactttc
cagacacgccttttgttcaaccaggccttcagcagaggtttggagatttcacttatcctt
gctggcaacaatccaaatgcagggatgtga
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integrated database retrieval system
