Panicum virgatum (switchgrass): 120688567
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Entry
120688567 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 40-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120688567
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120688567
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120688567
NCBI-ProteinID:
XP_039826857
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Position
9N:19077354..19082153
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AA seq
512 aa
AA seq
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MSGAGETAGGSKLQSPLLAASGPATTSAGGGHGVSRQLESILGDGARPWPRRALAASAVE
LRLLAQLAAPAVLVYMINYLMSMSTQIFTGHLGTLELAAASLGNNGIQIFAYGLMLGMGS
AVETLCGQAYGALKHDMLGIYMQRATVLLMATGVPLAAVYASCRPILVLLGESPEIAGAA
ATFVYGLIPQIFAYAAIFPIQKFLQAQSIMAPSAYISAATLAAHLALSYLVIYRLGLGLL
GASLMLSFSNWVIAVGQFVYIVTSRRCRLTWTGFSWQAFSGLPEFFKLSAASAVMLCLET
WYYQILVLIAGLLKDPELALASLSVCMTISGWVFMISVGFNAAASVRVSNELGAGNPKSA
AFSVVVVTVLSFILSVIISVIILLCRDYISYIFTEGEDVSQAVSQLTPLLAFTLILNGIQ
PVLSGVAVGCGWQAFVAYVNVGCYYIVGIPLGCLLGFYFDLGAAGIWSGMIGGTLMQTLI
LVWVTFRTNWDKEVEEAMKRLNKWEDNKSPIL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgccggcgagaccgcgggcggcagcaagctgcagagcccgctgctggccgcc
tccgggccggcgaccacatcggccggcggcggccacggggtgagccggcagctggagagc
atcctgggcgacggggcccggccgtggccgcggcgggcgctggcggcctctgcggtggag
ctgcggctgctggcgcagctggcggcgccggccgtgctggtgtacatgatcaactacctc
atgtccatgtcgacgcagatcttcaccggccacctcggcacgctggagctcgccgccgcc
tcgctggggaacaacggcatccagatcttcgcctacggactcatgcttggcatgggtagc
gccgtggagactctatgcgggcaggcgtacggcgctctcaagcacgacatgctgggcatc
tacatgcagcgcgccaccgtcctgctgatggccaccggcgtcccgctcgccgccgtctac
gcctcctgccgcccgatcctcgtcctcctcggcgagtcgccggagatcgccggcgctgcc
gccaccttcgtctacggcctcatccctcagatctttgcgtacgccgccatcttccccatc
cagaagttcctgcaggcgcagagcatcatggcgcccagcgcctacatctccgccgccacg
ctcgccgcccacctggccctcagctacctcgtcatctaccggctcggcctggggctcctc
ggggcctcgctcatgctcagcttcagcaactgggtcatcgcggtcgggcagttcgtgtac
atcgtcaccagccggcgctgccgcctcacgtggaccggcttctcctggcaggcgttctcc
ggcctgcccgagttcttcaagctctccgccgcctccgccgtcatgctctgcctcgagacg
tggtactaccagatactcgtgctcatcgccggcctgctcaaggaccccgagcttgcgttg
gcctcgctgtcagtctgcatgacaatctcagggtgggtgttcatgatctcagttggcttc
aatgcggcagcaagtgtcagagtgagcaacgagcttggtgccggcaacccaaagtcggca
gctttctccgtcgtggtggtgacagtgttgtccttcatcctgtcagtgataatctcagtg
atcatcctcctctgccgggactacatcagctacatcttcaccgagggcgaggacgtgtcg
caggccgtgtcccagctgacgccgctgctggctttcaccctcatcctcaacggcatccag
ccggtcctgtcgggggtagctgtggggtgtggatggcaagccttcgtcgcatatgtcaat
gtcggctgctactacatcgttggcatcccccttgggtgcctcctggggttctactttgat
cttggagcggcgggtatttggagtggtatgattgggggtaccctgatgcagacattgatc
ctggtatgggttacattcaggaccaactgggacaaagaggttgaagaagccatgaaaaga
ttgaataaatgggaagataataagtcccctatattgtga
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