Panicum virgatum (switchgrass): 120688568
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Entry
120688568 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 40-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120688568
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120688568
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120688568
NCBI-ProteinID:
XP_039826858
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Position
9N:19070173..19076985
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AA seq
498 aa
AA seq
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MAGGDDDAHGGSGARLESILADASAPRARRAWAAGAIELRLLMRLAAPAVVMYMINYLMS
MSTQIFAGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAYGAQKYEMLGIYL
QRSAVLLCATGVPLAVIYAFSEPLLVLLGQSPAIARAAAVFVYGLVPQIFAYAINFPIQK
FMQAQSIVLPSAYISTATLALHVLLSWAVVYKAGLGLLGASLVLSLSWWVIVAAQFAYIV
TSPKCRHTWTGFTCQAFSGLGDFLKLSAASAVMLCLETWYFQVLVLIAGLLPNPELALDA
LSVCMTISGWVFMISVGFNAAASVRVSNELGAGNPKSAYFSVWVVTALSALISIIISIVI
LCLRNYISYLFTEGEVVSNAVADLCPLLAVTLILNGIQPVLSGVAVGCGWQQFVAYVNIG
CYYIVGVPLGALLGFVFKLGVKGIWGGMIGGTCMQTAILLWVTLRTDWNKEVEEAQKRLN
RWEDEKTEPLLAGVSNGN
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggggacgacgacgcgcacggcgggtccggggcccggctggagagcatcctg
gcggacgcgtcggcgccgcgggcgcggcgcgcgtgggcagcgggcgccatcgagctgcgc
ctgctgatgcgcctggcggcgccggcggtggtcatgtacatgatcaactacctcatgtcc
atgtccacgcagatcttcgccggccacctcggcaacctcgagctcgccgccgcctcgctc
ggcaacaccggcatccagatcttcgcctacggcctcatgctgggcatgggcagcgcggtg
gaaacgctctgcggccaggcctacggcgcccagaagtacgagatgctcggcatctacctg
cagcgctccgccgtgctcctgtgcgccaccggcgtgcccctggccgtgatctacgccttc
tccgagccgctcctggtgctcctggggcagtcgccggcgatcgcccgcgccgccgccgtc
ttcgtctacggcctggtcccgcagatcttcgcctacgccatcaacttccccatccagaag
ttcatgcaggcgcagagcatcgtgctcccgagcgcctacatctccaccgccacgctcgcg
ctgcacgtgctcctgagctgggccgtcgtctacaaggccggcctcgggctgctgggcgcc
tccctggtgctcagcctcagctggtgggtcatcgtcgccgcgcagttcgcctacatcgtg
acgagccccaagtgccggcacacgtggacggggttcacctgccaggcgttctcgggcctc
ggggacttcctcaagctctccgccgcgtccgccgtcatgctctgcctcgagacctggtac
ttccaggtcctcgtgctcatcgccggcttgctcccgaaccctgagcttgccctggatgcg
ctctctgtttgcatgacgatttcagggtgggtgtttatgatctcggtaggattcaatgcc
gctgcaagtgtgagggtgagcaatgagcttggtgccggcaacccaaagtctgcgtatttc
tccgtgtgggtcgtgactgcgctctctgcgctaatcagcatcatcattagcattgtgatc
ctctgcttgcgcaactacatcagctacttgttcacggagggtgaggtggtctcaaatgca
gtggcagatctctgcccgctgcttgccgtcacgctcatcctcaatggcatccaacccgtt
ctgtcaggtgtcgctgttggatgtggatggcaacagttcgtggcctacgtgaacatcggc
tgttactacattgttggcgtgccccttggcgcccttctcgggttcgtcttcaagctcggc
gtaaagggtatttggggtggtatgattggaggaacttgcatgcagacggccattttgctg
tgggtcaccttgagaacagattggaacaaagaggtagaagaagctcagaaaaggctgaac
agatgggaggatgagaagacggagccccttcttgcgggggtcagcaatggcaattaa
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