Panicum virgatum (switchgrass): 120688570
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Entry
120688570 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 40-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120688570
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120688570
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120688570
NCBI-ProteinID:
XP_039826861
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Position
9N:19098861..19115367
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AA seq
521 aa
AA seq
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MGTASDQQHAPLLSPDGGGGSEIIAAAAPPCDGGGGGHGVSAELERILADESAPPARRLW
RAARAELRLLVALAAPACAVYMINYLMSMSSRIFCGQLGTLELAAASLGNVGIQVFAYGL
MLGMGSAVETLCGQAYGAHRYEMLGVYMQRSFVLLAAAGVPLAAIYFFSDRILVLLGEPA
RIAGAARVYVLGLLPQIFAYAANFPIQKFLQAQSIVAPSAYISAATLAAHLALSYLAVYR
LGLGLLGASLVLSLSWWVVVAAQFAYIATSPRCRLTWTGFSCRAFSGLPEFLGLSAASAV
MLCLETWYAQITVLIAGLLKDPELALDSLAVCMSLAGWSFMVSVGFNAAASVRVSNELGA
GHAKAAAFSVKVVTAVSVAVACAIAAAVLCLRDRIGYVFTSGDDVARAVSAMAPLLAVTI
VLDGIQPVLSGVAVGCGWQAFVAYVNIACYYGIGIPLGCVLGFHFDLGAMGIWGGMIGGL
FAQTLILIWITLRTDWNKEVEQARMRLNKWEGKKKPILAED
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgggcacggcgagcgaccagcagcacgcgccgctcctgtcgcccgacggtggcggcgga
tcagagattattgccgccgcggctccgccatgcgatggcggcggcggcgggcacggggtg
agcgcggagctggaacgcatcctggcggacgagtcggcgcccccggcgcggcggctgtgg
cgcgcggcgcgggcggagctccggctcctcgtggcgctggccgcgccggcctgcgccgtg
tacatgatcaactacctcatgtccatgtcctcgcgcatcttctgcggccagctcggcacg
cttgagctcgccgccgcctcgctcggcaacgtcggcatccaggtcttcgcgtacggcctc
atgctgggcatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgcgcaccgg
tacgagatgctgggcgtctacatgcagcgctccttcgtcctgctcgccgccgccggcgtc
ccgctcgccgccatctacttcttctcggaccggatcctcgtcctcctcggcgagcccgcg
cggatcgccggcgccgcccgggtctacgtcctcggcctcctcccgcagatcttcgcgtac
gccgccaacttccccatccagaagttcctgcaggcccagagcatcgtggcgcccagcgcc
tacatctccgccgccacgctcgccgcgcacctcgccctcagctacctcgccgtctaccgc
ctcgggctgggcctcctgggcgcttcgctcgtgctcagcctcagctggtgggtcgtcgtc
gccgcgcagttcgcgtacatcgccacgtccccgcggtgcaggctgacgtggacggggttc
tcctgccgggccttctccggcctgccggagttcctcgggctctccgccgcgtccgccgtc
atgctctgcctcgagacctggtatgcgcagatcaccgtgctcatcgccgggttgctcaag
gacccggagctcgcgctcgattcgctcgcggtgtgcatgtccttggcaggatggtcgttc
atggtgtcggtaggcttcaatgctgctgcgagcgtgagggtgagcaacgagctcggggct
gggcacgccaaggcggcggccttctccgtcaaggtggtgacggcggtgtcggtggcggtg
gcgtgcgccatcgccgccgccgtgctgtgcctccgcgaccgcatcggctacgtcttcacc
agcggggacgacgtcgcgcgcgccgtctccgccatggccccgctgctcgccgtcaccatc
gtcctcgacggcatccagcccgtcctgtcaggtgtggcggttggctgcggttggcaggcg
ttcgtggcgtatgtgaacatcgcgtgctactacggcatcgggatccccctcggctgcgtg
ctggggttccactttgacctgggcgccatgggaatatggggtgggatgatcggtggattg
tttgctcagacgcttatacttatctggatcacacttcgcaccgactggaataaagaggta
gaacaagcgcgcatgaggctaaataaatgggaaggcaagaagaagcccattttggcggaa
gactga
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