Panicum virgatum (switchgrass): 120688608
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Entry
120688608 CDS
T07260
Name
(RefSeq) serine/threonine-protein phosphatase PP2A-4 catalytic subunit-like
KO
K04382
serine/threonine-protein phosphatase 2A catalytic subunit [EC:
3.1.3.16
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03015
mRNA surveillance pathway
pvir04136
Autophagy - other
pvir04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120688608
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120688608
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120688608
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120688608
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120688608
04131 Membrane trafficking [BR:
pvir04131
]
120688608
03036 Chromosome and associated proteins [BR:
pvir03036
]
120688608
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120688608
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120688608
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Catalytic subunits
120688608
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120688608
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
Others
120688608
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120688608
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120688608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
IBV_3B
Motif
Other DBs
NCBI-GeneID:
120688608
NCBI-ProteinID:
XP_039826911
LinkDB
All DBs
Position
9N:77815882..77820745
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AA seq
379 aa
AA seq
DB search
MERRVHVRSRRTHLAGGLPSSTLPPSLSDFLPRCQSHSSLSLSPRLAAGDELELELLPRL
ADDGGVMEPMNVDNGGCGGLDAQIEQLMQCRPLAEQEVKSLCEKAKEILMEESNVQPVKS
PVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRHPHR
ITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDCFPLTALVESEIFCLHGGL
SPSIENLDSVRSLDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDTSEQFNH
TNNLKLVARAHQLVMEGYNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCNGHTFIQFE
PAPRRGEPDVTRRTPDYFL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcgggtccatgtgcggagcaggaggacccacctggcaggtggccttccgtcc
agtactctccctccctctctctccgattttctcccccgctgtcagtctcactcctcgctc
tctctctcgcctcgcctcgccgccggcgacgagctcgagctcgagcttcttcctcgtctc
gccgacgacggcggcgttatggagcccatgaacgtagacaacggcggctgcggcggcctt
gacgcgcagatcgagcagctgatgcagtgccgcccgctcgccgagcaggaggttaagtca
ctgtgcgagaaggccaaggagatattgatggaggaaagcaatgttcagcctgtcaagagt
ccagtgacgatatgtggtgatatacatggacaatttcatgatcttgtagagctttttcgg
atcggcggaaagtgtccagataccaattacttatttatgggggattacgtggaccgtggc
tactattctgttgagactgtcactctgctagtagcactgaaagtgcgccacccacatcga
attacgatcctccgtgggaaccatgaaagtcggcagatcacacaggtgtatggattctac
gacgaatgcctgcgaaagtacggcaatgcaaatgtatggaagacatttacagacctcttt
gattgttttcctcttacagctctggtggaatctgagattttctgccttcatggtggttta
tctccatcaattgaaaatcttgatagcgtacgtagcctagatcgtgtccaagaggttcct
catgagggacctatgtgtgatcttttatggtcagatccggatgatcgatgtggttggggt
atatctcctcgtggtgctggctacacttttggccaggacacatcagagcagtttaatcac
acgaacaatctcaaacttgtagctcgagcccatcaattagttatggaaggatataactgg
gctcatgaacaaaaagttgtcaccatattcagtgctccaaactattgttaccgatgtggc
aatatggcatccattttggaagttgacgactgcaacggtcacacttttatacagtttgaa
ccagcccctaggagaggtgagccagatgtgacccgaagaacaccagattatttcctttaa
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