KEGG   Panicum virgatum (switchgrass): 120688679
Entry
120688679         CDS       T07260                                 
Name
(RefSeq) putative casein kinase II subunit beta-4 isoform X1
  KO
K03115  casein kinase II subunit beta
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03008  Ribosome biogenesis in eukaryotes
pvir03083  Polycomb repressive complex
pvir04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    120688679
  09126 Chromosome
   03083 Polycomb repressive complex
    120688679
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    120688679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvir03009]
    120688679
   03036 Chromosome and associated proteins [BR:pvir03036]
    120688679
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  90S particles
   Kinase
    120688679
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     120688679
SSDB
Motif
Pfam: CK_II_beta Ribonuc_2-5A
Other DBs
NCBI-GeneID: 120688679
NCBI-ProteinID: XP_039827006
LinkDB
Position
2K:complement(57090620..57094513)
AA seq 271 aa
MYKQGGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGGRDHHRLVVPSSASSIPKGR
CSEGESDSDSEASDVSGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVP
YYDYALDLILDIESSHGDMFTEEQNELVESAAEMLYGLIHARYILTSKGLAAMLEKYKNY
DFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFP
HLFLMTYEHLKPQKPSQRFVPRVFGFKLHKP
NT seq 816 nt   +upstreamnt  +downstreamnt
atgtataagcaggggggagcggggctggaccggaagcggatcagcgacgcgctcgacaag
cacctcgagaaggctgtcgcgtcaccgtccacgtcgagggggtcggcgggaggcggcggc
gggcgggaccaccaccgcctcgtcgtgccatcctccgcgtcgtccatccccaagggccgc
tgctctgaaggggagtctgattctgatagcgaagcgtcagatgttagtggctctgatgga
gaagacacatcatggatttcatggtattgcaaccttagagggaacgagttcttctgtgag
gtcgacgacgactacatacaagatgacttcaacctttgtggcctcagcagccaagttcct
tattatgattatgctctcgatctcattttagatatcgagtcatctcatggtgatatgttc
actgaggaacagaatgagctggtagaatcagctgcagagatgctgtatggcttgattcac
gcacgctacattctgaccagtaaaggactggctgcaatgctggagaaatataagaactac
gactttgggcggtgcccacgagtttactgctgcggtcagccatgcctaccagttggacaa
tcggatatccatcggtctagtactgtgaagatatactgccccaagtgtgaagacatctac
tacccacggtccaagtaccaaggcaacatcgatggtgcatactttgggacgacattcccc
catctgttcctgatgacatatgagcacctcaagccccagaaaccctcacagcgctttgtt
cctcgtgtctttgggttcaagctccacaagccatga

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