Panicum virgatum (switchgrass): 120688793
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Entry
120688793 CDS
T07260
Name
(RefSeq) scarecrow-like protein 9
KO
K27753
GRAS family protein LISCL
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120688793
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
GRAS
120688793
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
120688793
NCBI-ProteinID:
XP_039827100
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Position
9N:complement(17834487..17836676)
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AA seq
729 aa
AA seq
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MEFNDKSNTNFDDFSSSLLSTSGSYAPSQKFVDPANESNDLELFLHPPNSTNYYPPVSST
SNDEGHFTSNTSYSSSSKTYAPQFCEVSSNVTPDWYGISVADSSRSSWVNSDITINYINK
LLMQEDNDDKVKLHHGEYALRAMEEPFYKLLGQSRPAYPLLPLCSSDHLNNLDGCMNKSS
GQSSSSCSAYMDPTNNHSNDNLQAVEAPWSLSDIVKETKHFAQGTHSMERGLDVDGLSVA
EERSREKPVNVADKRMDVSSEVQCQNDPHTEDFCLLEGRSTKQLAISFNGPTRDEMFDRV
LLFSEHKPMDEGIVLGEKRTNKSAHQNDQGRASSARRRTKGKKQQKKEVVDLRTLLIHCA
QAVSVSNYTLASDILSIIRKNCSISGDDTERLASCLVDCLEARLDGTGSQLYQKLITKFR
NAMGFLKVFQLSLAINPFQMATYHFSNKTILEVTKGKPKVHIIDFGIFLGFQWPSLFEQL
AKREDGPPKVRITGIEKPQPGFRPDQMNKNTGHLLAEYASMFNVPFEYQVISSKWETIHV
EDFHIEEDDVLIVNCLYRMEQLGDETVSINSARNKVLSTIRMTKPKVFVHGVVNGSYSAP
FFLTRFKEVMYHYSALFDILDKTVPRDNEARMILERDVYLCSILNVIACEGSDRIERPES
YKKWKSRNLKAGLEQLPLNPDIVKVTRDVVGQYHKDYVVGEDDQWLLLGWKGRILKAIST
WKPNESYET
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaatgacaaatctaatactaattttgatgatttctcaagtagcttgttgagt
acttcaggaagctatgccccatctcagaaatttgttgatccagccaatgagtctaatgat
ttggagttatttttgcacccaccaaactccacgaattattaccctcctgtttcaagcact
tctaatgatgaaggacattttacatcgaacacctcctattcgagttcgagtaaaacatat
gctccccaattctgcgaggtcagtagcaatgtgacaccagattggtatggaatcagtgtg
gcagactcttccagaagcagttgggtcaactcagatataaccatcaactacataaataag
ttgttgatgcaggaggacaatgatgacaaggtaaaattacatcatggagagtatgccctt
agagctatggaagagcctttctataaacttctggggcaaagtagaccagcttatcctcta
ttaccactatgtagcagtgatcatctgaataacctcgacggctgcatgaacaagtcttcc
gggcagtcatccagtagctgctctgcttacatggacccaactaataatcattctaatgac
aacctgcaagccgttgaagctccatggagtctgtctgacattgtcaaagagacaaaacat
ttcgctcaagggacgcacagcatggagcgtggtttggacgttgatgggctttccgttgct
gaagagcgtagccgagaaaaaccggtgaatgtcgcagacaaaagaatggacgtatcatct
gaggttcagtgtcaaaatgatccacacactgaagatttttgtttgttagaaggaaggagt
acaaagcagttggctatttcattcaacgggccaacccgagatgagatgtttgacagggtt
ctactcttctcggagcataagcctatggacgaaggtattgttctgggagaaaagaggaca
aacaaatcagcacatcagaatgatcaaggaagagcatcatcagctcggcggaggacaaag
ggtaagaagcaacaaaagaaagaggtggtagatctgagaacccttcttatccactgtgca
caagcagtatctgtcagtaactacaccttagcaagtgacatactgagcatcataaggaaa
aactgctcaataagtggcgatgataccgagaggctagcatcttgcctagtggactgcctt
gaggctcgattggatggaactgggagtcagctgtatcagaagttgatcacaaaattcaga
aatgctatgggatttttaaaggtattccaattaagtttagcaataaaccctttccagatg
gcaacatatcatttctcaaataagacaatccttgaagtcacaaagggaaagccaaaggtg
cacattattgattttggcattttcttgggttttcaatggccatcattgtttgagcaactc
gcaaagagggaagatgggcctcctaaggttcggatcacaggtattgagaaaccccagcca
ggatttcgaccagatcaaatgaataagaacacgggacatctgttagctgagtatgctagc
atgttcaatgtgccttttgaatatcaagtaatatcatcaaaatgggaaaccatccatgtc
gaagatttccacattgaggaagatgacgtgctgatagtcaactgcctataccgaatggag
caactcggtgatgagacggtatccattaacagtgccaggaataaggttctcagtaccatt
agaatgacgaagccaaaagtttttgttcatggagtggttaatggatcatacagcgccccc
ttctttctaacacgttttaaagaagtcatgtaccactactctgcattgtttgatatcctt
gataaaactgtcccacgagataatgaggcaagaatgatcttagagagggatgtctatcta
tgttcaattctcaatgtcattgcatgcgaaggatcagacaggattgagagaccagagagt
tataagaaatggaagtcacgaaacctgaaggcaggccttgagcagctcccactgaatcca
gacattgtgaaagtaacaagagacgtcgtcggacaatatcacaaagattatgttgttggc
gaagatgatcaatggttactactaggatggaagggaaggatactgaaagcaatatccaca
tggaaacctaatgagtcgtacgaaacctaa
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