Panicum virgatum (switchgrass): 120688802
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Entry
120688802 CDS
T07260
Name
(RefSeq) 60S ribosomal protein L4-1-like
KO
K02930
large subunit ribosomal protein L4e
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120688802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvir03011
]
120688802
Ribosome [BR:
pvir03011
]
Ribosomal proteins
Eukaryotes
Large subunit
120688802
Archaea
120688802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L4
Ribos_L4_asso_C
Motif
Other DBs
NCBI-GeneID:
120688802
NCBI-ProteinID:
XP_039827109
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All DBs
Position
9N:4330232..4333155
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AA seq
404 aa
AA seq
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MAAAARPLVSVRALEGDMATDSAGVPLPDVLRAPIRPDIVRFVHKLLSCNSRQPYAVSRR
AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNI
HLRRVAVASALAATAVPSLVLARGHRVESVPELPLVVSESAESIEKTAQAIKILKQLGAY
ADAEKAKDSVGIRPGKGKMRNRRYINRKGPLIVYGTEGSKIMKAFRNLPGVDVANVERLN
LLDLAPGGHLGRFVIWTECAFKKLDEVYGTFETPSAKKKGFVLPRPKMANADLSRLINSD
EVQSVVKPTNKVVKRREPRKNPLKNMAAVLKLNPYLGTARKMAALAEAARVKARKEKLDS
KRTKLSPEEASKVKAAGKAWYKTMISDSDYTEFENFSKWLGVTQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcgcgccccctggtctccgtgagggccctggagggcgatatggcgacg
gactccgccggcgtcccgctgccggacgtcctccgcgcgccgatccgccccgatatcgtc
cgcttcgtccacaagctcctgtcctgcaacagccgccagccctacgcggtgtcacgccgc
gccggtcaccagacatccgcggagtcctggggaacgggacgtgcggtgtcccgtatcccc
cgtgttcccggcggcggtacccaccgcgccggccagggagccttcggtaacatgtgccgt
ggcggacgcatgttcgcgcccaccaagatctggcgccgctggcaccgtcgcgtcaacatc
cacctccgtcgcgtcgccgtcgcctccgccctcgccgccaccgctgtcccgtccctcgtc
ctcgcccgcggccatcgcgtggagtccgtccccgagctcccactcgtcgtctccgaatct
gcggagtccattgagaagaccgcccaggccatcaagatcctcaagcagctcggtgcctac
gctgatgctgagaaggccaaggactctgttggcatccgccccggcaaggggaagatgcgc
aaccgtcgctacatcaaccgaaagggacccctcattgtctacggcactgagggctcaaag
attatgaaggctttccgcaacctcccaggtgttgatgttgcgaatgtcgagcgcctcaac
ctactcgacctcgcccctggtggccaccttggccggttcgtgatctggaccgagtgcgcg
ttcaagaagcttgatgaggtgtacggtaccttcgagacgccttcggctaagaagaagggt
ttcgtgctcccgaggcccaagatggccaacgctgacctgtctaggctcatcaactctgat
gaggtgcagtctgtcgtgaagcccaccaacaaggtggtgaagcgcagggagcctaggaaa
aacccgctgaagaacatggctgctgtgctcaagctgaacccgtacttggggactgcacgc
aagatggcagctcttgctgaggcagcgcgtgtcaaggccaggaaggagaaattggactcc
aagaggaccaagctcagcccagaggaggcttctaaggtcaaggctgctggaaaggcgtgg
tacaagaccatgatctcggacagtgactacacagagtttgagaacttctccaagtggctt
ggtgtgacacagtga
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