Panicum virgatum (switchgrass): 120688853
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Entry
120688853 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 5-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120688853
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120688853
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
120688853
NCBI-ProteinID:
XP_039827147
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Position
9N:complement(22206070..22207125)
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AA seq
278 aa
AA seq
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MPTVDNYTAASAAVGARSTGRHLLHIEGYSHTKALFAGESIPSQSFSVGGRAWCIWYYPR
GAADDQDDGDGDAALYISLFLVLDDSIPEPAYAEATFHLLDQAGRPVPSCTHATGLNEYS
AAGARHGVPAFIPRDFLEASGHLVDECFRIRCDVSVRWQWHTEARPDAPPSDLRRHLGDL
LASGEGADVTFQVAGETFSAHRSVVAARSPVLKAKLSAGTAAAACVRIDDVAPQVFEALL
HFVYTDSLNAVMATDGFEHLVKSCPALLKDLISKLAAR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtggacaattacaccgccgcctcggccgccgtaggggccaggtcgaccggg
cgccacctgctgcacatcgagggctactcgcacaccaaggcgctcttcgccggcgagtcc
atcccgtcccaatctttcagcgtcgggggccgcgcgtggtgcatctggtactaccctcgc
ggcgcagcagacgaccaggacgacggagacggggacgccgccctctacatctccctcttc
ctcgtcctcgacgacagcatcccggagcccgcctacgcggaggccaccttccacctgctc
gaccaggcggggagaccggtgccgtcgtgcacccacgccacaggcctcaacgagtactcg
gccgccggcgcccggcacggcgtccctgctttcatccccagggacttcctggaggcgtcg
gggcacctcgtggacgaatgcttcaggatcaggtgcgacgtctccgtccggtggcagtgg
cacaccgaggccaggccggatgcgccgccgtccgacctgcgccggcatctcggggacctc
ctcgcgtcgggagaaggcgccgacgtcacgttccaggtcgccggcgagacgttcagcgct
cacaggagcgtcgttgcagcccgttctccggtgctgaaggcgaagctctccgccggcacg
gccgcggcggcgtgcgtaaggatcgacgatgtggcgcctcaggtgttcgaggccctgctg
cacttcgtgtacaccgattcactgaacgcggtcatggcgaccgatggctttgagcatctt
gttaagagctgccctgctctcttgaaggacttgatctccaagttggctgcccgttga
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