Panicum virgatum (switchgrass): 120688930
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Entry
120688930 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 6-like
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120688930
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120688930
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GFIT
Motif
Pfam:
MATH_2
BTB
MATH
TRAF-mep_MATH
Motif
Other DBs
NCBI-GeneID:
120688930
NCBI-ProteinID:
XP_039827210
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Position
9N:complement(28198712..28199683)
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AA seq
261 aa
AA seq
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MASPVPPRPSSGRPSRGTTDGYSRIKDKLPTGKSIQSRSFSAGGRRRCILCYPNGQTSNC
ANFISVYLQLHKSAGEPVMARAKFDLLDRDGKPVPSNTCTTTLSEFSPGGSGYGFSEFIN
REFLENSEHLSNDCFKISCDIIIPDELRTENRIIAAPPLASSLAVPPSYLDRHLGDLLVS
KEGADITFQVAGEEFSAHKFLLVARSRVFKAELWGAMKEGATTGDCVRVDGMLPQVFKAL
LHFVYTDSLPRMEEQEEAVMA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccccgttccgcctcggccatcgtcggggaggccgtcacggggcacaacagac
ggctactcgcgcatcaaggataagctccccaccggcaaatccatccagtctcgctctttc
agtgcggggggtcgccgccggtgcatcctctgctaccccaacggccagacctccaactgc
gccaacttcatatccgtctacctccagctccacaagagtgctggagagcccgtgatggcg
cgagccaagttcgatttgctcgatcgggatgggaaaccagtgccatcaaacacctgtacc
acaaccctgagtgagttttcccccggcggctcagggtacggcttctctgagttcattaac
agggagttcctggagaattcggagcacctctccaacgactgcttcaagatcagctgtgac
atcattattcccgacgagctccgcacggagaacaggattattgcagcaccaccgcttgct
tcttctctcgcagtgccaccatcttacctagatcggcatctcggcgatctcctcgtgagc
aaagagggcgccgacatcacattccaagtcgccggcgaagaattcagcgcgcacaagttt
ctcctcgtggcccggtcgcgggtcttcaaggcggagctgtggggtgccatgaaagagggc
gccaccaccggggactgcgtccgggtcgatggcatgttgcctcaggtgttcaaggccttg
ctccacttcgtctacaccgactcgctgccgcggatggaggagcaagaggaggccgtgatg
gcctag
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