KEGG   Panicum virgatum (switchgrass): 120689180
Entry
120689180         CDS       T07260                                 
Name
(RefSeq) DNA polymerase alpha subunit B-like
  KO
K02321  DNA polymerase alpha subunit B
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120689180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120689180
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    120689180
SSDB
Motif
Pfam: DNA_pol_E_B OB_DPOA2 CDC48_N Pol_alpha_B_N
Other DBs
NCBI-GeneID: 120689180
NCBI-ProteinID: XP_039827440
LinkDB
Position
2K:complement(57791990..57796710)
AA seq 628 aa
MEAEIRAEFESSGFSIGGAGPEDAAEILSTLLTYCINYKMSPADLVSNWEVYYLNRQLDG
LKLERSYLDGFLSHLQNEVKERLIEEEANLHVYSSNDVDMLLNNSHADEAAFLDTPGSKQ
EKPPGESSNTELTPLTNDRPSSSRMAKTNGDRITPFATRVNKFTQQYVLNSDNAASMPRN
HEAETTEDELIRRIQPSQRCSLQVQRSQPEPGCRFMYDRMEDRFNYLEDRIRKSATLFSA
SGLCGEPADATLASEDKMFAVGMVTCDGEGRLNEKSILLQGSVEHSRGERVRLDLKDLDH
FSLFPGQVVGIEGRNPSGHCFVASKLIDSIPVSVDVQLPSAKKQAVDNGSHHQNSDVGTL
SRELSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLILMGPFVDSDHPDIKKGTVDQ
SFHDIFYSEVLRKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQIS
SLANPSLFSSNQIHFGCCTVDILKQISGEEISRKPPGGKPGDRIGRLATHILKQQSYYPL
YPPADGVPLDFSLAKEALEISSTPDVLLLPSDLAPFVKVLSLGEGSDDQKQFICLNPGRL
AKGISGGTFVELYYNEDTSRTNASIIRI
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggaggcagagatccgcgccgagttcgagagcagcggcttctccatcgggggcgccggc
cccgaggacgccgccgagatcctctccacgctgctgacctactgcatcaactacaagatg
agccccgcggacctcgtctccaactgggaggtctactacctcaacaggcaattggatggc
ttaaagctcgaaagatcatatcttgatggttttctttcacaccttcaaaatgaagttaaa
gagaggctaatagaagaagaggccaaccttcacgtttactccagtaacgatgttgacatg
ctccttaacaattcacatgcagatgaagcggcatttcttgacacaccaggctctaaacag
gagaagccgcctggagaatcatctaacactgagttgactcctctgacaaacgacagacca
tcatccagcagaatggccaaaacaaatggtgaccggatcaccccttttgccacacgagta
aataaatttactcaacagtatgttcttaattctgataatgcggctagcatgccaaggaat
catgaggctgaaaccacagaagatgaactaattagaagaattcagccaagtcaaagatgt
tccttacaagttcagcgctcgcagcctgaaccaggttgcaggttcatgtatgacagaatg
gaagacagatttaactacttggaggatcggatacgaaaatcggcaaccttgttttctgca
tctgggttatgtggagaacctgcagatgctacccttgcttcagaggacaaaatgttcgca
gtcggcatggtaacctgtgatggggaaggtcgtctgaatgaaaaatctatcttgctacag
ggcagtgttgagcactcaaggggagagcgtgtgcgccttgacttgaaggatctcgatcac
ttctctttgtttcctgggcaggtggtgggtattgaaggccgcaatcccagtggacactgt
ttcgttgcatcaaaattgattgattcgataccagtctctgtggatgttcaacttcctagt
gctaagaaacaagctgttgataatggaagccaccaccaaaattctgacgttggcactctg
tcaagagaattgtcatcggtcatcgcggcaggtccctacacaacaaccgataatctgttg
tttgagccattgcaagaacttctttcatatgcttgtcgtaagcagcctcaactgctcata
ttgatgggaccctttgtagactctgatcatcctgacataaaaaagggaactgttgaccag
tcctttcatgatattttctattctgaggttctgagaaagattcaagactttacccaatat
ttggggaacactgttcgtgtaattctcattccatctgtgcgtgatgctcaccatgacttt
gttttccctcagcctgcatttgacttgaatttaccagaagatatcacacatcagatttct
tctctggcaaatccaagtttattcagttctaaccagatacatttcggctgttgtacagtg
gacatcctgaaacagatcagtggtgaggaaatttctcgcaagccacccggtggaaagcct
ggcgacaggattggacgactagcaacgcacatattaaagcaacagagctactatcctcta
tatcctcctgctgatggtgtgccattggacttctcacttgctaaggaagccctggagatc
tcatcgactccagatgttctcctgcttccttccgatcttgctccatttgtgaaggtgctc
tcccttggggaaggcagcgatgatcaaaaacagtttatttgcttgaaccctgggaggttg
gcaaagggtattagtgggggtacattcgtggagctttactacaatgaggacaccagcagg
acaaatgcctccatcatccgtatatag

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