Panicum virgatum (switchgrass): 120689225
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Entry
120689225 CDS
T07260
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 1-like isoform X1
KO
K19891
glucan endo-1,3-beta-glucosidase 1/2/3 [EC:
3.2.1.39
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120689225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
120689225
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
120689225
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
Enzymes
120689225
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
DUF5900
Motif
Other DBs
NCBI-GeneID:
120689225
NCBI-ProteinID:
XP_039827476
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All DBs
Position
2K:57825168..57830532
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AA seq
547 aa
AA seq
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MGSWSRGGSGSSLLTPLLFFLLSLHSLSLTVATAGSPVVVSAAGSGEPYVGVTIGTAVTN
LLSPSDLADFLRAQHITRVRLYDADPRLLSALASAGARAIVGVPNDELLALGSSPATAAA
WVARRVLPFAGVNSSTPAVISAIAVGDEVPTALPSALPVLLPAIRSLASALAAANLSSPI
PVSTPLPFSVVEDPFPPSQAFFNQTLAKTFVAPLLAHLANTSAPLMLNLYPYYSLMQSDG
VIPLDNALFRPLPPSLEMVDPNTLLHYTNVFDAMLDAVRVAVRNLNVSGSGGVPILVTET
GWPSYGDRRAEPYASKDNADTYNSNLIKHVLQDKPGTPMAPGAAAQSSAYIYELFNEDLR
PGPVSEANWGLFYGNGTPVYLLHVSGAGGLLGNDTTDRSFCVAADDAEEKAVQAAMDWAC
GPGRADCTAIQPGQGCYLPNDVRSHASYAFDAYYQSQGRAAGSCYFQGAGMVTTTDPSHD
NCLFPGSKQLGNHTKSGSASNTTTPTSDAEGSAIWRLRTGREKGFSLFLRLLLSITVVIV
TDSNFWT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggggagttggagcagaggagggagcggtagcagcttgctcaccccactcctcttcttc
ctcctctctcttcactctctgtctctgaccgtcgcgaccgcaggctcgccggtggtggtg
tcggcggcggggagcggcgagccgtatgtgggcgtgaccatcggcacggcggtgacgaac
ctgctgtcgccgtcggacctggccgacttcctccgcgcgcagcacatcacccgcgtgcgc
ctctacgacgcggacccgcgcctgctgtcggcgctggcctccgcgggggcgcgcgccatc
gtgggcgtccccaacgacgagctcctggcgctgggctcctccccggcgacggccgcggcg
tgggtggcccgccgagtgctcccattcgcgggcgtcaactccagcaccccggccgtcatc
tctgccatcgccgtcggggacgaggtgcccaccgcgctcccctccgcgctgcccgtgctc
ctcccggccatccggtccctcgcctccgcgctcgccgcggccaacctgtcctcccccatc
ccggtgtccacgccgctgcccttctccgtggtggaggacccgttccccccgtcgcaggcc
ttcttcaaccagaccctggccaagaccttcgtcgcgccgctgctcgcccacctcgccaac
acctcggcgccgctgatgctcaacctgtacccctactactcgctgatgcagagcgacggc
gtgatcccgctggacaacgcgctgttccggccgctgccgccgtcgctggagatggtggac
cccaacacgctgctccactacaccaacgtgttcgacgcaatgctcgacgccgtgcgcgtg
gccgtgcggaacctcaacgtgagcggctccggcggcgtgcccatcctggtgacggagact
gggtggccgtcgtacggcgaccggcgggcggagccgtacgcgagcaaggataacgcggac
acgtacaactcgaacctgatcaagcacgtcctgcaggacaagcccgggacgcccatggcg
cccggcgcggcggcgcagtcgagcgcctacatctacgagctcttcaacgaggacctccgg
ccgggccccgtgtcggaggcgaactggggcctgttctacggcaacggcacgccggtgtac
ctcctgcacgtgtcgggcgccggcgggctcctggggaacgacacgacggaccggtccttc
tgcgtggcggcggacgacgcggaggagaaggcggtgcaggcggccatggactgggcgtgc
gggcccgggcgcgccgactgcacggcgatccagcccgggcaggggtgctacctgcccaac
gacgtgcgcagccacgcgtcgtacgccttcgacgcctactaccagtcgcagggccgcgcc
gccgggtcctgctacttccagggcgccggcatggtcaccaccacggatcccagtcatgac
aactgcttattccctggaagtaagcagctgggtaaccacaccaaatctggcagcgcaagc
aacactacaacgccgacaagtgacgccgagggatctgcaatatggaggctaagaacagga
agggagaaagggttctcgctcttccttcggctgctgctgagcatcacggtggttatcgtg
acagattcaaacttttggacatga
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