Panicum virgatum (switchgrass): 120689297
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Entry
120689297 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120689297
KO
K22184
bromodomain-containing protein 9
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120689297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120689297
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
120689297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Motif
Other DBs
NCBI-GeneID:
120689297
NCBI-ProteinID:
XP_039827533
LinkDB
All DBs
Position
2K:57955813..57963295
Genome browser
AA seq
1255 aa
AA seq
DB search
MPRSPSPSPSPSPSPERNLHQPARRRVAAASSQMLHHHHRGGRSPSPPPRRSLRPRRAAA
ASSRPLVDDFFPFPSSPSSSPSRPRQRRPSPEPSSSDSGADGGGGGSSASDRRRRKLKLV
VKLSQLPPDQHHGRAPPPPSYSDDSDGAGEVGGDGSGDEEQVKPPKKRRIEPRADRSRHH
EIGGGVRGDPASAPRTKRLPVPGTARTTPLPDRKALEMILEKLQKKDTYGVFAEPVDPEE
LPDYHDVIEHPMDFGTVRRKLARNAYRSFEQFEDDVFLICSNAMQYNAPDTIYFRQAHSI
QELARKKFQELRDEGISIENNHIKIEQKARPNSCNREPVKKPILRYQDDDLDFLSRKEQV
KRPNPKNLEGDVIFKDQVKKPVAGAQDESSLSHKERVRKPISRNSDDGLSSSFHKDRPKK
LFSKNSEDDLSSSFGKEQVRKAISKNSENDESSAFHKQQVKKTTPQSSKNDLPSKKKHIK
KPVCSNREDPDFSSRKERVEDPICTNVEGAGFLSTKRLAEKPISQSSEDLGHCHQELSKK
PSRRDGQDNLGNYCNKETAKKPSRMNSQDTMGSDISAATIASVGDGSNGLSMSQANTTEP
ADCTIANGFLDKDTSSPLDEIRSEKTDDIFAMPSYKSIVVDETRRKTYEEQPSVEFDPVF
DIFSTEPKELVNVGLDAEHSYAYARSLARFAGSLGAQGWRIASERIRQALPAEVKYGRGW
VGEYEPPLPSILVVNDQSRYVKSSEANVRRNTSLPRDNERLRPAESNNPKDMSLSLPNRI
TTSSTNVVGVPGPLESPEFKPRIFGVTAEPQHRSTDALSPHANHRGPGNVAKTKRRANDQ
KRKGSSSSSARPSEMKPQKEASGVPDMPALNRTAGQPRPFFKPAESNRTQQMRKVDSLKS
NVPSEMAPQRLECAKGASSGVHDTPSSNGQPKHFFQSQAAAASGVHDIPSSNGQPKHLFQ
SQVAASSDAHVPSNGQPKHFFQSQGPASSGGHDMPSSNGQPKPFFQPQEATVPQPRNEAT
WVYHGRPGDGKVGTSNKSRPSTSVGFVNKNQAVNAATFAMNLNGQKNVSDLAKPVGSTAM
PGLANIPNRSLDASRNMFSAFPAAARENQSIPPAPSAQSWISFGTSTENKPAIVSPTFLD
NNSAWKMPFANVRPSDDMKISAVPQFFRQPVQVVRESPIQNNGLVIFPQLVQPDFMRSQG
QPQWQGLVPHMQQKPSKDVLRPDLNIGFPSPGSPPARQSSGINLEAQQPDLALQL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggtcgccgtcgccatctccgtctccgtcgccgtcgccggagaggaacctccac
caacccgcgcgccggagggtcgccgccgcctcgtcccagatgctccaccaccaccaccgc
ggcggccgctcgccgtcgccgccgccccgccgctcgctccgcccgcgccgagccgccgcc
gcctcctcccgcccgctcgtcgacgacttcttccctttcccctcctcgccgtcgtcttcg
ccctcccgcccgcggcagcggaggccgtctccggagccgtccagctccgattccggcgcc
gacggcggcggcggcggatcctcggcctccgaccgccgccggcgtaagctcaagctcgtt
gtcaagctctcccagctgcccccggaccagcaccacggccgggccccaccgcccccctcg
tactcggacgactccgacggggctggggaggtgggcggggacggcagcggcgacgaagag
caggtcaagccgcccaagaagcgccggatcgagccgcgcgccgacagatctcgccatcac
gagattggcggtggtgttagaggcgacccagcgagcgcgccgcggacgaagcggcttcca
gtgccagggactgcgaggacgactccgctgccggaccggaaggcactggagatgattcta
gagaagctgcaaaaaaaggatacatacggagtgtttgctgagccagtggacccggaggag
ttgcctgattatcatgatgtgattgagcacccaatggacttcggtacagtcaggaggaag
cttgccaggaacgcataccgctcattcgagcaatttgaggatgatgtcttcttaatttgc
agcaacgcaatgcagtacaatgcacctgatacaatttacttcagacaggcccattccata
caagagctggcaagaaagaagtttcaggaactgagggatgagggcatatccatagaaaac
aaccacataaagattgaacagaaagctagaccaaactcctgcaatagagaaccagttaaa
aagcccatattgcggtatcaggatgatgatctagacttcttgtcccgcaaagagcaagtt
aagagacccaatccaaaaaatttggaaggagatgtaatctttaaagatcaagttaagaaa
cctgtggccggggcacaggatgagagttctttatcccacaaagagcgagttaggaaaccc
atctctaggaattcagatgatggtttaagttcctcattccacaaagaccgacctaagaaa
ctgttctccaaaaattcggaggatgacctcagctcctcatttggcaaagagcaagttagg
aaagccatttccaagaattcggaaaatgacgaaagctccgctttccacaaacagcaagtc
aagaagaccaccccccagagctcaaagaatgacttaccatccaagaaaaaacatattaag
aagccagtttgctcaaatagagaagatccagatttctcatcccgcaaagagcgtgttgag
gatcccatttgcacaaatgttgaaggtgcgggcttcttatccacaaaacggctggcagag
aagcccattagtcagagtagcgaggacctgggccattgccaccaggagttgtctaagaaa
cctagtcgcagagatgggcaagataatctaggtaactattgcaacaaagagactgctaag
aagccatctcgtatgaatagccaagacacaatgggttcagatatctctgctgcaactatt
gcttctgtgggagacggctctaatggcttgagcatgtcgcaggctaatactactgaacct
gctgattgcaccattgccaatgggtttttggacaaagacactagctctccattagatgaa
ataagatctgagaagaccgacgatatttttgctatgcctagctacaagtcaattgtggta
gatgagactagacggaaaacttatgaagaacaaccttcagtggagtttgatccagttttt
gacatattctcgactgaaccaaaagagcttgttaatgttgggcttgatgctgagcactcg
tatgcatatgcgagaagtctggctcgttttgctggttcgcttggtgctcaaggctggaga
atcgcttctgagcgcattcggcaagcattacctgctgaagtaaagtatggtcgtggttgg
gttggagaatatgagcctccattaccgtctattctggttgtgaatgatcaatctagatat
gtgaagagctctgaggcaaatgtgcgaaggaatacttcgctgcctagggataatgaaagg
ctcagaccagcagaaagtaataatccaaaggatatgagtttgagtctacctaaccggata
actactagtagcactaatgtagttggagtgcctgggccacttgagagtccagaatttaag
ccaagaatatttggtgttactgctgagccccaacacaggagcactgatgcattatcacca
catgccaatcatagaggacctggtaacgttgcaaagaccaaaagaagagcaaatgaccaa
aagagaaaaggcagctcatcttccagtgctcgccctagtgagatgaaaccacagaaagaa
gcttctggtgtgcctgatatgccagccctgaacagaactgctggccagcctagacccttt
ttcaaaccagcagaatcaaatagaactcagcaaatgagaaaagttgactcattaaaaagc
aatgtccctagtgaaatggcaccacagcggcttgagtgtgcaaaaggtgcttcttctggt
gtgcatgatacgccttcctcaaatgggcagcctaagcacttcttccagtcacaagcagca
gcagcttctggtgtgcatgatataccttcttcaaatgggcaaccaaaacacttattccag
tcacaagtggcagcttcttctgatgcgcatgtgccatcaaatgggcagcccaagcacttc
ttccagtcacagggaccagcttcatctggtgggcatgatatgccttcttcaaacgggcag
ccgaaacccttcttccagccacaagaagcgactgtaccacagcccagaaatgaagcgacg
tgggtgtaccatggacgacctggtgatgggaaagttggaacatccaacaaaagcagaccg
tcaaccagtgttgggtttgtcaataaaaatcaagcagtaaatgctgcaacttttgccatg
aatttgaatggacaaaagaatgtcagtgaccttgcaaaaccagtaggctcaactgcaatg
cctggcctcgcaaatataccaaatagaagtcttgatgcttctcggaacatgttctcagca
tttcctgcagctgctagggagaatcagagcattccgccagctccatctgctcaatcatgg
atctcatttggtacttctacagagaacaaaccagccattgttagcccgactttccttgac
aataattctgcttggaagatgccatttgcaaatgttcgcccttctgatgatatgaaaata
agtgctgttccccagttctttaggcaacctgttcaggtagttagagaaagcccaattcaa
aacaacggtttggtaatatttccccagttggtccagccggatttcatgagatcgcagggc
caaccccaatggcaagggcttgttccccacatgcaacagaagccgagcaaggacgtactc
agaccagacctgaacattgggttcccgtctccaggttcgccaccagctcgacagtcatct
ggcatcaatttggaagcacaacagccagaccttgcattgcagttatga
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