Panicum virgatum (switchgrass): 120689547
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Entry
120689547 CDS
T07260
Name
(RefSeq) exocyst complex component SEC15A-like
KO
K19985
exocyst complex component 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120689547
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Tethering complex
Exocyst complex
120689547
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120689547
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec15_C
EXOC6_Sec15_N
Syndetin_C
Deam_C
Motif
Other DBs
NCBI-GeneID:
120689547
NCBI-ProteinID:
XP_039827777
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Position
9N:29687289..29690994
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AA seq
793 aa
AA seq
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MTAQTKKRGAAENGDGGIGLGLAAFIVNNEDLGPIVRHAFESGKPEALLHSLRNIVKMKE
VEIEEICRLHYEEFILAVDELRSVLVEADDLKGTLSDENLLLQEVASALLLKLDELLELY
SVNRSVGEALATLKICLKVTSLCKICNRDIAQARLHSALKTLELIEKDYMQNIPLELLKK
VIQKQIPVMKLYIEKKICIEFNEWLVYIRKIGKEIGQAAMDQVSLARQKDEGMCARQREA
EECSHVGFDEHAYSLDVENMDEEVMLEFDLAPVYRAHHIHIGLGHREKFREYYFNNRLMQ
LNLDLQISTSQPFVDSHQPFLAQIAGFFIIEDRVLRTADGLLSESQVETMWETAISKVTS
ILEQQFSLMDTANHLLNVKGYINLLGTTMKKYGYQATSLVEILGKNRDKYIELLISDCHK
QIKNVLSKDSYERMVIKKENEYDMYVAALQLEPTDVAPDLPYVALFSSSVPNACRIVRSF
IEDLVRYLSYGSSMNSYNVVKSYLDKFLIEVLNDAFLNLIHGGSLEFQQMVQIAGNIAVL
EQSCDMFLCHAAQVCGVPRRLLEKPHSGLTAKAVLKASRNAAYSGLITLVNSKVDKFMLQ
LPSINWTVEEAPEHANDYMNEVIIYLHDVVSSGQQIVPRDALYKVVSGALSHIADSLITV
LLSDRVKRFNANAVAGIDIDLKMLEGFADDTFHSTGLSDLRKDTSFKDCLVEIRQLIDLL
LSNQPESFMNPVTREKNYGSLDHKKVAMICDKFKDAPDSLFGSLSSRGTVQSAVQSARKK
SLDVLKRRLKDFS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcagacaaagaagagaggtgctgccgaaaatggggatggtggtatcggtttg
ggccttgcagccttcatcgtgaacaatgaggacttgggtcccattgtgcggcatgctttc
gaatctgggaagcctgaagctctcttgcacagcctcaggaacattgtgaagatgaaggaa
gttgagattgaagagatttgtagacttcactatgaggaattcatacttgcggttgacgaa
cttcgttctgtgctggttgaagctgatgaccttaagggcacgttgtctgatgagaatctg
ctattgcaagaggttgctagcgccttgctgctgaaacttgatgagcttcttgagttgtat
tcggtaaataggagtgttggggaggcccttgctacattgaagatctgtctgaaagtcacc
agtctgtgcaagatatgcaacagggacattgcacaagccaggttacattccgcattgaaa
actttggagttgattgagaaggactacatgcaaaatattcctttggaacttctgaaaaag
gttattcagaaacaaattcctgttatgaagctgtacatcgagaaaaaaatttgtattgag
ttcaatgagtggcttgtatatattagaaagataggtaaggagattgggcaggctgcaatg
gaccaggtctccctggctcgacagaaagatgaggggatgtgtgcccgacagagggaagca
gaggaatgtagccatgttgggtttgatgagcatgcttattccttggatgtggagaacatg
gatgaggaagtgatgctagaatttgatcttgcaccagtgtacagagcacaccatatccac
attggccttggtcatagggaaaagtttcgagaatattactttaacaataggcttatgcag
ctcaatttggacttgcagatttctacatcgcaaccctttgttgactcccaccaacctttc
cttgctcagatagctggcttttttattattgaggaccgtgttcttcgaactgcagatggg
cttctatctgagagtcaggtggagacaatgtgggaaacagctatctctaaggtcacatca
atcttagagcagcagttctctctcatggatactgccaaccacctcctcaacgtaaaaggt
tatatcaatcttttgggtacaaccatgaagaaatatggataccaagctacatcgttggtt
gaaattcttggcaaaaatagggacaagtatattgagctgcttatctctgattgccacaag
cagataaagaacgtcttgtctaaggactcatatgagcggatggttataaagaaggaaaat
gaatacgacatgtacgttgcagcgcttcaacttgaacccactgatgtagcaccagatttg
ccatatgtcgctctgttttcctcttctgttcccaatgcttgccgtattgtgcgatctttc
attgaggacttggtcagatacttgtcatatggtagcagcatgaactcctacaatgtggtg
aagagttacttagacaagttcttaattgaggtattaaatgatgcttttctgaaccttata
catggtggctccctggaatttcaacagatggtgcagattgcaggaaacattgcagttctt
gagcagtcctgtgatatgttcctttgccatgctgctcaagtttgcggtgttcctaggcgt
cttcttgagaagccccattctggtttgactgctaaagctgtgctcaaagcctccaggaat
gcagcatacagtggattaattactttggtcaattccaaggttgataagtttatgttgcag
ttgcctagcatcaattggactgtggaggaagctccagaacatgcaaatgactacatgaat
gaagtcattatctatcttcatgatgtggtgtcttctgggcagcagattgtaccaagagat
gccctatacaaggttgtctccggtgcactaagccatatcgcagactctttaataacagta
cttcttagtgacagagtcaaaaggttcaatgcaaatgctgtagctggtattgacattgac
ctgaaaatgttggaggggtttgcagatgacacatttcacagcactgggttgtcagacctg
agaaaggacacaagtttcaaagattgcctagtcgagataaggcagctcatcgatcttctg
ctcagcaatcagcctgagagcttcatgaatcctgtaaccagggagaagaattatggatcc
ttggatcacaagaaggtggcaatgatttgcgacaagttcaaggatgcaccagacagcttg
tttggtagcctttcaagccgagggactgtgcagagtgctgtgcagagtgcccgaaagaaa
tccttggatgtgctgaagagaaggttaaaggattttagctga
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