Panicum virgatum (switchgrass): 120689618
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Entry
120689618 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 40-like isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120689618
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120689618
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120689618
NCBI-ProteinID:
XP_039827903
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Position
2K:58293893..58297497
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AA seq
497 aa
AA seq
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MGRTGDHHAVDGRLEALLSGAGEGGSGPCWLRRMAAAAALELRLLAPLAVPAVVVYMLII
VMSSTTQIVCGQLGNVQLAAASLGNNGIQVFAYGLMLGMGSAVETLCGQAYGAEKYEMLG
VYLQRSTVLLMATAVPLAAMYASSEPLLLLLGQSPEIAGAAAEFAYGLIPQIFAYAANFP
IQKFLQAQSIVAPSAYILAASFAFHVPLSWVAVYALGLGLLGASLTLSLTWWVLVLAQFA
YILWSPRCRDTWAGFTWAAFADLPGFAGLSIASAVMLALEVWYFQVLILLAGVLPDPQVA
LDALTVCTSIQSWVFMISVGFNAAASVRVGNELGAGNPRSAAFSAWMVTALSAFVSAIAG
LVTFLLRDKLSYIFTTGEVVSRAVADLCPLLVGTIVLCGIQPVLSGVAVGCGWQAMVAYI
NIGCYYFIGIPLGVLLGFKFDYGIKGLWGGMIGGTLIQTLILIWITLRTDWNKEVEEARK
RLDKWDDTRQPLLANKE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggacgggtgaccaccacgccgtcgacggccggctagaggcgctgctctccggc
gccggcgagggcggctccgggccatgctggctccggcgcatggcggcggcggcggcgctg
gagctgcggctgctggcgcccctcgccgtgccggccgtggtggtctacatgctcatcatc
gtcatgtcgtccaccacgcagatcgtctgcggccagctcggcaacgtccagctcgccgcc
gcctccctcggcaacaacggcatccaggtcttcgcctacggcctcatgctcgggatgggc
agtgcggtggagacgctgtgcgggcaggcctacggcgccgagaagtacgagatgctgggc
gtgtacctgcagcgctcgacggtgctgctcatggccaccgccgtgccgctcgccgccatg
tacgcctcctcggagccgctgctcctgctgctcggccagtcgccggagatcgccggcgcc
gccgcggagttcgcctacggcctcatcccgcagatcttcgcgtacgccgccaacttcccc
atccagaagttcctgcaggcgcagagcatcgtggcgcccagcgcctacatcctggccgcc
agcttcgcgttccacgtgccgctcagctgggtcgccgtgtacgcgctgggcctgggcctg
ctcggggcctcgctcacgctcagcctcacgtggtgggtcctcgtcctggcccagttcgcg
tacatcctgtggagcccgcggtgccgggacacgtgggccgggttcacatgggccgccttc
gccgacctgccggggttcgccggcctgtccatcgcgtcggcggtgatgctggcgctcgag
gtctggtacttccaggtgctcatcctcctcgccggcgtgctgccggacccgcaggtcgcg
cttgacgcgctcactgtctgcacttcgatccagtcatgggtgttcatgatctctgtgggc
ttcaatgcagctgccagtgtgagagtagggaatgagctcggcgcgggcaaccccaggtct
gccgcgttctctgcatggatggtcaccgctctgtcggccttcgtatcagcaatagctggt
ctcgtcactttcctgctgagggacaagctcagctacatcttcaccaccggcgaggtcgtc
tcgcgcgccgtagccgatctgtgccccttgctcgttgggaccatcgtgctctgcgggatc
cagcccgtgctgtcaggtgtggccgttggttgtgggtggcaagcaatggtagcgtacatc
aacattggatgctactacttcatcggcatacccctcggtgtgcttcttggattcaagttt
gactatggaatcaagggattgtggggaggcatgattgggggcaccctgatccaaacactt
attctgatctggatcacgttgagaaccgactggaacaaggaggttgaggaagcgcggaaa
agattagataagtgggacgacacaaggcagccccttctcgcaaacaaggagtga
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