Panicum virgatum (switchgrass): 120689764
Help
Entry
120689764 CDS
T07260
Name
(RefSeq) heat shock cognate 70 kDa protein 2-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
pvir04141
Protein processing in endoplasmic reticulum
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120689764
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120689764
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120689764
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120689764
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120689764
03009 Ribosome biogenesis [BR:
pvir03009
]
120689764
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120689764
04131 Membrane trafficking [BR:
pvir04131
]
120689764
03051 Proteasome [BR:
pvir03051
]
120689764
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120689764
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120689764
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
120689764
Spliceosome [BR:
pvir03041
]
Complex B
Other components
Prp19 complex
120689764
Complex C
Prp19-CDC5 complex
120689764
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120689764
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120689764
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120689764
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
120689764
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120689764
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
120689764
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120689764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
120689764
NCBI-ProteinID:
XP_039828096
LinkDB
All DBs
Position
9N:complement(2483355..2487258)
Genome browser
AA seq
648 aa
AA seq
DB search
MAPTKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAK
NQVAMNPINTVFDAKRLIGKRFSDASVQSDIKMWPYKVIPGSGDKPMIVVQYKGEEKQFS
AEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINE
PTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRLVNHFVQEFKRKHKKDITGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDF
YSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVL
IPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQ
ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQDAEKYKSEDEEHK
KKAEAKNSLENYAYNMRNTIQDEKIASKLPVDDKKKIEDAVEQAIQWLDSNQLAEVEEFE
DKMKELEGLCNPIIAKMYQGAGADMAGGMEDDAPAAAGGAGPKIEEVD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccaagggagaggggccggcgatcggcatcgacctgggcacgacgtactcg
tgcgtcggcgtgtggcagcacgaccgcgttgagatcatcgctaacgaccaggggaaccgc
accacgccgtcgtacgtcgccttcaccgactccgagcgcctcatcggcgatgccgcgaag
aaccaggttgccatgaaccccatcaacaccgtctttgatgctaagcgtcttattggcaaa
cggttttctgatgcctctgtccagagtgatattaagatgtggccatacaaggttattccg
ggctcaggggataagccaatgattgtagtgcagtataagggtgaggagaagcagttctcc
gctgaagaaatttcttctatggttcttatcaagatgcgcgagatcgctgaagcttacctt
ggatcaactgtgaagaatgctgtggtcactgttcctgcttacttcaatgattcccagagg
caggcaactaaagatgctggtgttattgctggtctcaatgtcatgcgtatcatcaatgaa
ccaactgctgctgcgattgcctatggtcttgacaagaaagctactagtgttggcgagaag
aatgtccttatttttgaccttggtggtggcacctttgatgtctctctactcactattgag
gagggtatatttgaggtgaaggccacagctggtgacactcaccttggtggggaggacttt
gacaaccgcttggtgaaccactttgtccaagagtttaagcggaaacacaagaaggatatc
actggaaaccccagggctttgagaaggcttaggacttcatgtgagagagctaagaggaca
ctttcttctacagcccagactacgattgaaattgattctctctatgaaggcattgatttc
tattccaccatcaccagagccaggtttgaggaacttaacatggatctattcaggaagtgt
atggagcctgtggagaagtgcctgagggatgccaagatggataagagcactgtccatgat
gttgtccttgttggtggttcgactaggatccccaaagttcagcagctgctgcaggacttc
ttcaatggaaaggaactatgcaagagcatcaatcctgatgaagctgttgcctatggcgct
gctgttcaggctgcaatccttagtggtgagggcaatgagaaggtgcaggaccttctcctc
cttgatgtgaccccactgtctcttggtcttgaaactgccggaggagtcatgactgtcctt
attccaaggaacaccaccattccaaccaagaaggagcaggtcttctccacctactccgat
aaccagcctggtgtgctgatccaggtttatgagggtgagagaacccggaccagggataac
aatctcctagggaaatttgagctctctggaatcccccctgctcctaggggtgtccctcag
attactgtgtgctttgacattgatgctaatggtattctgaacgtctctgctgaagacaag
acaaccggccagaagaacaagatcactatcaccaatgacaagggaaggctgagcaaggag
gacattgagaagatggtccaggacgcagagaagtacaagtctgaggatgaggagcacaag
aagaaggctgaggcaaagaactccctggagaactatgcctacaacatgaggaacaccatc
caggatgagaagatcgcctccaagctgcctgtggacgacaagaagaagattgaagatgct
gttgagcaggcaatccagtggctggacagcaaccagctcgcagaggtcgaagagtttgag
gacaagatgaaggagctcgaaggtctctgcaaccccatcattgccaagatgtaccagggc
gcaggcgctgacatggctggtggaatggaggatgatgctccggctgctgctggtggtgct
ggccccaagattgaggaagtcgactaa
DBGET
integrated database retrieval system
