Panicum virgatum (switchgrass): 120689795
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Entry
120689795 CDS
T07260
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1-like isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120689795
Membrane trafficking [BR:
pvir04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120689795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
TPR_DOCK
Motif
Other DBs
NCBI-GeneID:
120689795
NCBI-ProteinID:
XP_039828128
LinkDB
All DBs
Position
9N:complement(65507801..65522673)
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AA seq
1842 aa
AA seq
DB search
MEPAGAAAGEGQRFKRIPRQAWSGSLELDPLLNENLDQWPHLNELVQCYKADFVKDDGKY
GRYESVAPPSFQNQIFEGPDTDIETELQLGNTRHSKPEDATEDDTPSTSGRQIYETEPSA
SSSKVHCSLSPLPAYEPAFDWENERSLIFGQRVPEILPAIHNRFLHGLKITVKVLSLSFQ
AGLIEPFSGMICLYNRDRREKLSEDFYFHILPTDMQDAQISLDRRGVFSLDAPSPSVCLL
IQLEKAATEEGGVTPSVYSRKEPVHLTDKEKQKLQVWSRIMPYKESFAWAMIPLFEGNHA
GGLGDAASPSSPLAPSISGSSSQDSIVDPISKLTLDGKLNHYSSGSSVIVEISNLNKVKE
SYIEDSLHDPKRKVHKPVKGVLRLEVEKLHEGHNDVDNISEGGSMANDLNDAGDLNNGRC
SRSSFDGLRSSLNSSAVAQKYAHHNGKTSSADNGDNFQAFDFRTMTRSEPFSQLFHCLYV
YPLTVSLSLKRNLYIRVELRKDDSDIRKPPLEAVHPRERNTMLQKWGHTQIAVATRMASY
HDEVKISLPALLTPQHHLVFTFFHVDLQMKLEAPKPVIVGYSVLPLSTHIQLLSDVSLPI
LRELVPHYLQESGKERMDYLEDGKTVFRLRLRLCSSLFPVNERIRDFFVEYDRHTLHTSP
PWGSELLEAINSLKNVESTALLQFLQPILNMLLHLIGDGGETLQVAAFRAMVNILTRVQQ
ESSDGTERNRFLINYVDFAFDDFGDRQAPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLA
MAWFFLELIVKSMGLEQSRLFYHNLPLGEDVPPLQLKEGVFRCIMQLFDCLLTEVHERCK
KGLSLAKRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVLHDCKLTFLQIIC
DHDLFVEMPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAARILVVLICKHEFDARYQ
KSEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLVVILQIIRNLDDATLIKAWQQS
IARTRLFFKLLEECITHFEHNKTGDSMLLGASSRSPEIERPASPKYSERLSPSVNAYLSE
ASRHEIRPQGTPENGYMWNRVSPQLSSPNQPYSLREALAQAQSSRIGSTARALRESLHPV
LRQKLELWEENLSTAVSLEVLGITEKFSVAAGTRSITTDYAKLDCITSILMGLLSRSQPL
AFWKAFLPVVYNIFNFHGATLMARENDRFLKQIAFHLLRLAVFRNDSIRKRAVVGLQILV
RNSFNYFKNTTRLRVMLTITLSELMSDVQVTQMKSDGSLEESGEARRLRKSLEEMADVRS
KDLLKDCGLPVNALEAAPESSSDNRWSWVEVKHLSKCLVQALDAGLEHALLGSVVTVDRY
AAAEGFYKLAMAYAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVGRND
AVWSKEHVSSLRKICPIVSTDVSAEASAAEVEGYGASKLTVDSAVKYLQLANKLFAQAEL
YHFCASIQELIIPVYKSRRSYGQLAKCHTSLTNIYESILEQEASPIPFIDATYYRVGFYG
ERFGKLNKKEYVFREPRDVRLGDIMEKLSHIYEAKMDGNHTLHIIPDSRQVNADELQPGV
CYLQITAVDPVMEDEDLGSRRERIFSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLEDQW
KRRTVLQTEGSFPALVNRLLVTKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQ
LPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKR
AIRVHFRLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcgggggctgcggctggagaagggcagcggttcaagcggattccgcggcag
gcgtggtcggggagcctggagctggatccactgctcaatgaaaacttagatcagtggcca
catctaaatgaactggtacaatgctacaaggctgattttgtgaaggatgacggcaagtat
ggacgatacgagagtgttgcaccaccatctttccagaatcaaatttttgagggacctgat
actgacatagaaacagagctgcagcttggcaacactaggcattccaagcccgaggatgct
actgaagacgatacgccaagcacctcagggaggcaaatatatgaaaccgaaccatctgct
tcatcgtcaaaagtgcactgtagtctgtcaccactgccagcttatgagcctgcatttgat
tgggagaatgagagatctttgatatttggccaaagggtgccagaaattctccctgcaatt
cacaacaggtttctacatggcttgaagataactgtcaaggtactatctttgtcattccaa
gctggattaattgagcctttcagtggaatgatttgcttgtacaacagagatagaagggaa
aaactgtcagaagacttctattttcacatacttccaacagatatgcaggatgctcagatt
tccttggatcgtcgaggtgttttctcattggatgccccttcaccatcagtctgccttttg
attcaattagaaaaggctgctactgaagaagggggagtaacaccttctgtttattctcgt
aaagagcctgtgcacttaactgacaaagagaagcaaaaactgcaagtctggtctcgaatc
atgccttataaagagtcatttgcatgggctatgattcctctgtttgaaggtaaccatgct
ggaggtcttggtgatgctgcttctcctagcagtcctttagcaccgagtatatcaggatca
agttctcaagatagtattgtggaccctatttcaaagcttactttagatggaaaactcaac
cattactcaagtggaagctcagttattgtagagatatcaaacttaaacaaagtgaaggaa
agctatatagaggactccctccatgatccaaaacggaaagtacataaaccagtgaaaggt
gtattgagactagaagtggaaaaacttcatgaaggccacaatgatgtggataatatttct
gaaggcggaagcatggccaatgatttgaatgatgctggtgacctcaataatggcagatgc
agcaggagtagctttgatgggctccgcagttctttgaattctagtgctgttgcccagaaa
tatgctcatcacaacggtaaaacttctagtgctgataacggtgacaattttcaggctttt
gactttcggacaatgacccgaagcgaaccattttcgcaactttttcattgcctttacgtg
tacccgttgactgttagcttgagcctcaaacgaaacctatatataagagtggaactgaga
aaggatgattctgacatccgtaagcctccattggaggctgttcatcctagggagcggaac
acaatgttacaaaagtggggccatacacagatcgccgttgcaacaagaatggcttcctac
catgatgaagttaaaatcagtctgcctgctcttttgacaccccaacatcatcttgtgttc
acttttttccatgtagatctccaaatgaaacttgaagcaccaaaaccagtgattgttggg
tattcagtacttccgctctcgacacatattcagttactttcggatgtatccttgccaatt
ttgagagagctcgtcccacattacctgcaggaaagtggaaaggagagaatggactacctg
gaggatggaaaaactgttttcaggttgcgtttaaggctctgctcgtcattgtttcccgtt
aatgaaaggataagagacttttttgtcgagtatgaccgtcatactctacatacaagcccc
ccttggggttctgagcttcttgaggccataaatagtttgaagaacgtcgaatctacggca
ttgttacaatttctgcaaccgatacttaatatgctgctccatcttattggtgatggcggt
gagacccttcaggttgctgcatttcgagccatggttaacattttaacccgggtgcagcag
gagtcatcagatgggactgagagaaataggtttcttattaactatgttgattttgctttc
gatgactttggtgatcggcaagcacctgtgtatcctggtctatctactgtttggggaagt
cttgctcggagtaaggctaaaggttatagagttggtcctgtatacgatgatgtattggca
atggcttggttttttctggagcttattgtaaagtcaatgggattggaacaaagtcgtctc
ttctaccacaaccttccattaggtgaagatgttccaccgctacaattgaaagaaggtgtc
ttcaggtgcatcatgcaactttttgattgccttctaaccgaggttcatgagcgctgtaaa
aagggtttaagcttggcaaagcgcttgaacagcacgcttgctttcttttgctacgatctt
ttgtcaattattgagcctcgccaagtttttgagctggtttcgttgtatatggacaagttt
gccggagtttgtcagtcagtcctccacgactgcaaattgacattcctgcagataatatgt
gaccatgatctatttgttgagatgcctgggcgggacccctctgatagaaactatctatcg
tcagttcttattcaagagatctttctcaccttggaccatgatgatttgtctcaacgagca
aaggctgctcgaattttagtagtccttatatgcaagcatgaatttgatgcacgttatcaa
aaaagtgaagacaagctgtatattgctcagttgtattttcctcttatagggcagatcctt
gatgagatgcctgttttctataatctgaatgccgttgaaaagcgtgaggtcctagttgtc
attttgcaaatcataaggaacttagatgatgcaactcttatcaaagcatggcaacagagc
attgctagaaccagattgttcttcaaacttcttgaagaatgtataacccattttgagcac
aacaaaacaggagacagcatgctacttggtgctagttctcggagccctgaaattgagcgt
cctgcatccccaaagtactcggagcgattatccccatcagttaatgcatatttgtcggag
gcatcaaggcatgaaataaggcctcagggaacaccagaaaatggatacatgtggaataga
gttagccctcagctaagttctccaaatcaaccatattcattgagggaagcactagctcaa
gcccaatcttcaagaattgggtcaacggccagggcattgagagagtctctacatccagta
ctaagacaaaaattggaactttgggaagaaaatctcagcactgctgtgagcctggaagtg
ttgggaataactgagaagttttcagttgctgcgggcactcgtagcatcactactgattat
gctaagctagattgtataacatcaatcttaatgggtcttttatctaggagccagcccttg
gccttttggaaagctttccttcctgtggtctataatatatttaatttccacggtgcaaca
cttatggcaagggagaatgaccgcttcttgaagcagattgcttttcatcttttgcggctt
gctgttttccgaaatgattcgattagaaaaagggctgttgttgggctgcagattcttgtt
aggaactcatttaactatttcaagaacactacaaggctgagggtcatgttgacaattact
ttgtcagaattgatgtctgatgtgcaagtaactcagatgaaatccgatggttctcttgaa
gaaagtggtgaagctcgtcgccttaggaaatcactggaggaaatggctgatgtgagaagc
aaggatctgttaaaagattgcggcctccctgttaatgcattggaggctgctcctgaaagt
tcatctgataataggtggtcctgggtagaggtgaagcatctgtctaaatgtctagtccag
gcccttgatgctggtctggaacatgccctcttgggttctgtagtaactgtggacaggtat
gcggccgctgagggtttctataagctagctatggcctatgcacctgttccagatcttcac
attatgtggttgctgcacctgtgtgatgcacaccaggagatgcaatcatgggctgaagca
gcacaatgtgcagttgctgtagctggtgtgatcatgcaggcacttgttggaaggaatgat
gctgtgtggagcaaggagcatgtttcttccctgcgtaagatttgccctatcgtgagcact
gatgttagtgcagaagcctctgcagctgaagttgagggatatggtgcatccaaactaaca
gtggattcagctgtcaagtatcttcaacttgccaacaaactctttgcacaagctgaactc
taccatttttgtgcaagcatccaggaactcatcattcctgtgtataaaagcagaaggtct
tatggacagctggccaaatgccatacatcactcacaaacatctatgagtcaattcttgaa
caggaagccagtcctataccatttattgatgccacatactaccgagtaggtttctatggt
gagcgttttggcaagctcaataaaaaggaatacgtgtttagagagccgcgggatgtacgt
cttggtgacattatggaaaagcttagccatatatatgaggctaaaatggatggcaatcac
accttacacatcattccagactcgagacaagtcaatgctgatgaattgcaacctggtgtc
tgctatttacagatcactgctgttgatcctgtgatggaggatgaggacttgggtagcagg
agggaaaggatcttttctttatctactggtactgtacgtgcacgtgtgtttgatcgtttt
ctttttgacacaccattcacgaagaatggaaaaacacaaggtggcttagaagaccaatgg
aagagacgcacggtgcttcagacagagggttcatttcctgctttggtgaaccgcctgcta
gttaccaaatctgaatctctagagttctctcctgttgagaatgcgattggaatgatcgaa
acaagaacagctgcattgagaaatgaactagaagaaccacggagttctgaaggtgatcaa
ctacccaggcttcaaagcttgcaaaggatactccaaggaagtgtggctgttcaggtcaac
agtggagtgttaagtgtgtgcactgcattcttatccggtgaacctgcgaccaggctccgg
tcacaagaactgcagcagctcattgctgcattgcttgaattcatggctgtctgcaagcgt
gcgatccgtgtgcatttcagattgataggcgaagaagaccaagaattccacacccagctc
gtcaatgggttccagtcactcactgctgagctgtctcactatatccctgctatactttct
gagctatga
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integrated database retrieval system
