Panicum virgatum (switchgrass): 120689796
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Entry
120689796 CDS
T07260
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 4-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120689796
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
120689796
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120689796
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Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
120689796
NCBI-ProteinID:
XP_039828130
LinkDB
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Position
9N:65503453..65507291
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AA seq
499 aa
AA seq
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MAKQKASPPGAVRRRLGGAGASAVGWALRVATSIVAWTLLLHLFTFLGVPRPPLPIARPS
CLGGRNNSTAAEAVVAAGEAAHRVPPALPPRRLYKSNGYLLVSCNGGLNQMRAAICDMVT
VARYLNLTMVIPELDKQSFWADPSDFGDIFYVSHFIDSLRDEVKIVKELPRKFREKVPLS
MQPISWSSEKYYLRQILPLVRKHKVVRFSKTDSRLANNGLPLKLQKLRCYVNYNALRFTP
SIEALGNKMVSILRRTGSFIVLHLRYEMDMLAFSGCTHGCSDEETEELTRMRYAYPWWKE
KEIDSEKKRLEGLCPLTPGETTLVLKALGFPRDTRIYIASGEIYGGEKRLAVLKTEFPNV
VRKEMLLSDDELGPFQKHSTQMAALDYLVSVASDVFIPSNDGNMAKVVEGHRRFTGFHKT
IQLDRKKLVELIDLFEDQELSWEEFSVGVKELHMGRMSQPTRRRVIPGQPKEEDYFYANP
HECLGPARKRMERLKHIEI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagaaggcctcgcctccgggcgcggtccgccgccgcctcggcggcgccggg
gcatcggccgtcgggtgggcgctgcgcgtggcgaccagcatcgtggcctggacgctgctc
ctccacctcttcaccttcctcggcgtcccccgcccgccgctgcccatcgcgcgtccgtcc
tgcctgggcggccgcaacaactccaccgccgcagaagcggtggttgcggccggcgaggcc
gcacaccgggttcccccggctctgcctccgaggagactttacaagagtaatggctatctt
cttgtttcatgcaatggtggtctgaatcaaatgcgagcagcgatatgtgacatggtgact
gtagcacgctacttgaatctgacaatggtgatacctgaacttgataagcaatccttctgg
gctgatcctagtgattttggggatattttttatgtaagtcatttcatcgattcattgaga
gatgaagtgaagattgtcaaagaactcccgcggaagttccgtgaaaaagttcctctatca
atgcaaccaatcagctggtctagtgaaaaatactatttgaggcagatcttgcctctagta
cgaaaacacaaggtggtacgttttagcaagacagattctcgccttgcaaataatggcctt
cctctgaagctacagaaacttcgctgctatgttaactacaacgcattgagatttacacca
tccattgaggctctaggcaacaagatggtctcaattcttaggagaactggatcttttatt
gtgcttcatttgagatatgagatggatatgcttgctttctcaggatgtactcatggatgt
tctgatgaagaaacagaagagttgacaagaatgaggtatgcatatccctggtggaaagaa
aaggaaatagactctgagaagaaaaggcttgagggattgtgcccccttactcctggagaa
acaacattagtacttaaagctctcggtttccccagagacactcgaatatatattgcctca
ggtgaaatatatggtggtgaaaaaagactagctgtattgaagacagaatttcctaacgtc
gtgcggaaggagatgcttttatctgatgatgagttaggaccctttcagaagcactcgact
caaatggcagcactggactatcttgtttctgtcgccagtgatgtttttatccccagtaat
gatggaaacatggctaaagtcgtagaagggcaccgcaggtttacaggcttccataaaacc
atacagttggacaggaagaagttagttgagcttatagatctttttgaagaccaggagctg
tcctgggaagaattctctgttggtgtcaaggagctccacatgggccgaatgagccagccc
accagaaggcgggttatccccggacaaccgaaagaagaggactacttctatgctaatcct
catgaatgccttgggcctgcaagaaagcgaatggaaaggttaaaacatattgagatttga
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