Panicum virgatum (switchgrass): 120689814
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Entry
120689814 CDS
T07260
Name
(RefSeq) glutamate receptor 3.4-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120689814
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120689814
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
DUF7544
Motif
Other DBs
NCBI-GeneID:
120689814
NCBI-ProteinID:
XP_039828167
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Position
2K:58571759..58576999
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AA seq
939 aa
AA seq
DB search
MDGSKVVKNATLSSWSSEMGYAYFAAMLLCGFMVASGTTAANQNSTGDPARPAEVRIGAL
FTFDSVIGKAVRPAIELAVAHVNSDPSILRGTKLSVLMQDTNCSGFIGTIEALQLLAKDV
IAVLGPQSSAVAHVISHTVNELHVPLISFAATDPTLSSLEYPYFVRSTQSDYYQMDAIAS
IISQYQWKQVITIHVDDDYGRGGIMALGDALAKRKCKIVYKAKLPPGAANTTIENILMQV
NEMESRVYVIHVNPDSGLNVFSAAKSLGMMSSGYVWIATDWLSAVMDSSVHGTTDVMELT
QGVLVLRQHVSHSDIQKALLSKWNLTRNGSAYSMRAYDSVWLVAHAAERLLSEGNTISFS
ADTNLRATKGSNLQLDSLRIFNNGNKLLENVWNVNFSGVSGPVQFTLDRNLIHPAYDILN
IGGTGVRTIGYWSNISGLSVVAPENLYSSALNSSTNNVQLHSVIWPGQITEKPRGWEFSY
HGKPMRIGVPLRTSYKEFVTQDNGPDGVKGFAVDVFKAAISLLPYPVSCDFVLFGDGLKN
PSYSDLVQKVSENYFDAAIGDIAIVTNRTRLVDFTQPYIESGLIIVAPAKEVESNAWAFL
KPFTFQMWCVLGVIFLFVGAVVWVLEHRTNTEFRGPPRQQIMTVCWFSFSTMFFAHRENT
VSALGRFVLLIWLFVVLIINSSYTASLTSLLTVQELTSGIQGLDSLISSSSAIGYQVGSF
SRNYLVDELNIAESRLVPLNSASDYARALELGSGNGGVAAIIDELPYVEIFLSKYCKFKT
VGQVFTKSGWGFAFPRDSPLAEDLSTAILTLSENGNLQRIHDEWLSGTECSADNNGAASN
ALSLSSFWGLFLICGLACLLALVIFFLRIFCQYSRYSNQVEVQYPEPQIVSRSARLTTIK
SLISFVDKKEEEVKNALKQRPNGTQHPSIGSTATEEQST
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggacggatcaaaggtcgtcaagaacgcgacactttcttcctggtcctcggagatgggc
tatgcttacttcgccgccatgcttctgtgtggtttcatggtcgccagtggaaccacggca
gctaaccagaatagcaccggtgaccccgcaaggccggcagaggtgcgcatcggtgcgctg
ttcacgtttgactcagttattggaaaggcggtgaggcccgctattgagctcgctgtcgcg
catgtcaattctgatcctagtatactccgggggacgaaactcagtgttcttatgcaggac
accaactgcagtggatttattggcaccatagaagcgttgcagcttctggctaaagatgta
atcgcagtattaggtccacaatcctcggctgttgctcatgtcatttcccacactgtcaat
gaactccatgtccctcttatctctttcgcagccactgatcctaccctttcttcccttgaa
tacccttattttgtgaggtctacacaaagtgattactaccaaatggatgctatcgctagc
atcattagccagtatcaatggaaacaggtcatcaccatacatgttgatgatgactatggt
agaggtggcatcatggcactaggtgatgcccttgcaaaaagaaagtgtaagatagtctac
aaagctaagttaccgcctggtgctgcaaatactacaatcgagaatatcttgatgcaggtt
aatgaaatggagtcgcgtgtctatgttatccacgttaaccctgattctggtcttaacgtg
ttctcagctgcaaaatctttggggatgatgagcagtggctatgtatggatagcaacagac
tggctgtctgcagtgatggattcatctgtgcatggtactactgatgtgatggaacttaca
cagggagttctcgtgcttaggcagcatgtttctcattctgacattcaaaaagcattgttg
tccaagtggaatcttaccaggaatggaagtgcttactctatgcgtgcttatgactctgta
tggttagttgctcatgctgctgagcgccttttgagtgaagggaatacgatatccttttct
gcagacacaaatctgcgagctacaaaaggaagtaaccttcagttagattctctcaggatt
ttcaataatggaaataaactactggagaacgtgtggaatgtgaacttctcaggggtttct
ggtccagttcaatttaccttggatcggaatttaatccacccagcttatgatattctgaac
attggtggtacaggtgtaagaaccattggatattggtcaaatatttctggtctctcagtc
gttgccccagaaaacttatattcttcagcattgaactcttcaaccaacaatgtacagctc
catagtgttatatggcctggtcagattactgagaagccgcgtggttgggagttttcatat
catgggaagcctatgaggattggagtacctctccgaacaagctacaaagagtttgttaca
caagacaatggacctgatggagtaaaggggtttgcagttgatgtctttaaagctgcaata
agcttgttgccctatccagtttcttgcgattttgttttatttggagacggtttgaagaat
cctagctatagtgaccttgtccagaaggtttctgaaaattacttcgacgccgcaataggg
gacattgctatagtgacgaacagaacaagacttgttgattttacccagccatatatcgaa
tcgggtctcattattgtagctccagcaaaggaggttgaatcaaatgcttgggcttttctg
aaaccattcaccttccagatgtggtgtgtcctaggtgttatcttcctctttgttggtgca
gttgtttgggtacttgaacaccgtactaatactgagttccgtggacctccaaggcaacaa
attatgacagtgtgctggtttagtttctctaccatgttctttgcacacagagaaaataca
gtcagtgcacttggtagattcgtgctgctgatctggctctttgtagtgctgattattaac
tcaagctacaccgcaagcttgacatcacttctcacagttcaggagctgacatcagggatt
cagggcctcgatagcttgatctcgagctcaagtgcaattgggtatcaagttggatctttt
tccagaaactaccttgtcgatgagctcaatattgctgagtcccgtttggttccactaaac
agcgcatcagattatgcaagagcccttgagctagggtcaggaaatggtggtgtggctgca
attatcgatgagcttccatatgttgagatcttcttgtcaaaatactgcaaattcaagacc
gttggtcaggttttcacaaaaagtggatggggatttgccttcccaagggactcccctctt
gccgaggacttgtcaacagcaatcctgacactatcagagaatggtaatctccagaggatc
catgatgaatggttaagtgggacagagtgcagtgcagacaataatggggctgcgtcgaac
gccttgagcctgtcaagcttctggggcctcttcctcatctgtggtcttgcatgtctcctt
gctcttgtgattttcttccttcgcatattttgccagtacagcaggtatagtaaccaggtg
gaggttcaatatcctgagccccagattgtaagtcggtcagcaaggctaactaccatcaag
tcattgatatcgtttgttgataagaaagaggaggaggtgaagaatgctctcaagcaaaga
ccaaatggcactcagcatccaagcataggcagtacggctacagaagaacaatccacatga
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