Panicum virgatum (switchgrass): 120689919
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Entry
120689919 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 12-like isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120689919
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120689919
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Gene cluster
GFIT
Motif
Pfam:
MatE
BTP
Motif
Other DBs
NCBI-GeneID:
120689919
NCBI-ProteinID:
XP_039828304
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Position
9N:complement(5845040..5852099)
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AA seq
503 aa
AA seq
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MGSSEASLLLPHTRGKSEEEEEARAHDHGAKRWWWRRAAAASEGRWGEATAEAGRLAALA
GPMIAVALLQLTMQLISTVMVGHLGEVPLAGAAIANSLTNVSGFSVLMGLACGLETICGQ
AYGAEQYHKLALFTYRSIVVLLVASVPIAIIWLFLPDVLPLIGQDPQIASEAGKYALWLI
PGLFAYSVAQCLSKFLQSQSLIFPMVLSSLTTLTLFIPLCWFMVYKVGMGNAGAAFAVSL
CDWVEVTVLGLYIKFSPSCEKTRAAPTWETFRGIGSFMRLAVPSTLMICLEWWSYELLVL
LSGILPNPALETSVLSICISTVVLVYNLPYGIGTAASVRVSNELGAGNPDGARLVVVVSL
SIIICTAVLVSATLLSLRHFIGIAFSNEEEVVNYVTRMVPLLSISVLVDNLQGVLSGISR
GCGWQHLGAYVNLGAFYLIGIPVALVLGFAFHLGGAGFWIGMIAGGATQVTLLSVITAMT
NWGKMAEKARDRVFEESLPTQAD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttccgaggcgtcgctgctgctcccgcacacgcggggtaagtcggaggaggaa
gaggaggcgagggctcatgatcatggagcgaagcgctggtggtggcgtcgcgccgccgcc
gcctcggaaggtcggtggggcgaggcgacggcggaggccggccggctggcggcgctggcg
gggcccatgatcgcggtggcgctgctgcagctcacgatgcagctcatctccaccgtcatg
gtgggccacctcggcgaggtgccgctcgccggcgccgccatcgccaactcgctcaccaac
gtctcaggattcagcgtcctcatgggactcgcatgcggattggaaactatttgtggacaa
gcctacggcgcagagcagtatcacaagctagctttatttacctacaggtccatagttgtg
ctccttgttgcgagtgtgcccatcgccattatatggcttttcctcccggatgtacttcct
ctcataggacaggatccacaaatagcaagtgaggccgggaagtatgccttgtggcttatc
cctggtttattcgcctacagtgtggctcaatgcctgtcaaagttcctccagtcccagagc
ctgattttccccatggttttgagctccttgacaacgctcactctctttattcctttgtgc
tggttcatggtttacaaagttgggatgggtaatgctggagctgcttttgcagtcagcctc
tgtgattgggttgaagtcacggttcttggtctttatattaagttctcaccttcttgtgag
aaaactcgtgctgcacccacgtgggaaacttttcgaggaattggcagtttcatgcggttg
gctgtaccttcgactcttatgatttgtcttgaatggtggtcatatgagctgcttgttctg
ctttctgggatcttaccaaatccagcacttgaaacttctgtgctctcaatatgcatatct
acagtagtcttggtgtacaatctcccatatggcattggaacagctgcgagcgtgcgtgtg
tcaaatgagctaggtgcagggaacccagatggcgcccgcttagtagtagttgtctcctta
tccattataatttgcactgcggttctggtgagcgcaactcttctatcattgcgccatttc
atcggaattgctttcagcaacgaggaagaggttgtaaattatgtcaccagaatggtaccg
ttgctttcaatttcagttcttgttgacaacctccaaggagtcctttcaggtatttctaga
ggctgtggatggcagcatttaggtgcctatgttaacctgggcgcgttctatcttattggc
attcctgtggcgcttgttctcggtttcgcattccatctaggaggagctgggttctggatt
ggcatgatagctggtggagctacacaggtcactctcctatcagtcatcactgcaatgaca
aattgggggaagatggctgaaaaggctagggatagagtgtttgaggaaagtcttcctaca
caggcggattga
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