Panicum virgatum (switchgrass): 120689935
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Entry
120689935 CDS
T07260
Name
(RefSeq) tubulin alpha-3 chain
KO
K07374
tubulin alpha
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04145
Phagosome
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120689935
09142 Cell motility
04814 Motor proteins
120689935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120689935
03036 Chromosome and associated proteins [BR:
pvir03036
]
120689935
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120689935
04147 Exosome [BR:
pvir04147
]
120689935
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120689935
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120689935
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120689935
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120689935
Exosomal proteins of other body fluids (saliva and urine)
120689935
Exosomal proteins of colorectal cancer cells
120689935
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
120689935
NCBI-ProteinID:
XP_039828327
LinkDB
All DBs
Position
9N:complement(6002302..6005737)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGHMPGDKTVGHYDDAFTTFFSQTGAGK
YVPRAIFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPNYSNLNRLVSQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPAN
MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFTE
AREDLAALEKDYEEVGAEGGGDEDEEDEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgcatctcggtccacatcgggcaggccggcatccaggtcggcaacgcgtgc
tgggagctttactgccttgagcacggcatccagcctgatggccatatgcccggagacaag
actgtgggacactatgatgatgccttcaccaccttcttcagccagaccggcgcagggaag
tacgtgcctcgtgcaatcttcgttgatcttgaacccactgtgatcgatgaggtgcgcact
ggcatgtaccgtcagctcttccaccctgagcagctcatcagtggcaaggaggatgctgcc
aacaactttgcccgtggacactacacaattggcaaggagatcgttgacctgtgccttgac
cgcatccgcaagcttgctgacaactgcactggccttcagggcttcctggtcttcaatgct
gttggtggtggcactggttctggccttggttcgctcctcctcgagcgcctgtctgtggac
tatggcaagaaatccaaactgggcttcactgtatacccatctccccaggtgtcaacctcc
gttgttgagccctacaacagcgtgctctccactcactcactcttggagcacactgatgtc
tccatcctgctcgacaacgaggccatctatgacatctgcaggcgctcattggacattgag
aggcccaactactccaacctgaatcgccttgtgtctcaggttatctcatcgctgactgct
tccctgaggtttgatggtgccctcaatgtggatgtgaacgagttccagaccaacctggtt
ccttacccaaggatccacttcatgctgtcgtcgtatgcaccagtgatctcagcagagaag
gcctaccatgagcagctgtcggtggcggagatcaccaacagcgcgttcgagccggcgaac
atgatggtcaagtgcgaccctcggcacggcaagtacatggcgtgctgcctgatgtaccgt
ggtgacgtggtgcccaaggatgtcaatgctgctgtggccaccatcaagacgaagcgcacg
atccagttcgtggactggtgcccgacggggttcaagtgcggcatcaactaccaggcgcca
actgtggtgcccggcggcgacctcgccaaggtgcagcgcgccgtgtgcatgatctccaac
tccaccagcgtcgctgaggtgttctcccgcatcgaccgcaagttcgacctcatgtatgcc
aagcgcgccttcgtgcactggtacgtcggcgagggcatggaggagggggagttcacagag
gcccgtgaggacctggccgccctggagaaagactacgaggaggtgggtgctgagggcggg
ggtgatgaggacgaggaggacgaggagtactga
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