Panicum virgatum (switchgrass): 120689936
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Entry
120689936 CDS
T07260
Name
(RefSeq) malate dehydrogenase, glyoxysomal-like
KO
K00026
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00270
Cysteine and methionine metabolism
pvir00620
Pyruvate metabolism
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pvir_M00012
Glyoxylate cycle
pvir_M00168
CAM (Crassulacean acid metabolism), dark
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120689936
00620 Pyruvate metabolism
120689936
00630 Glyoxylate and dicarboxylate metabolism
120689936
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120689936
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120689936
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
120689936
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GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
3Beta_HSD
Semialdhyde_dh
Motif
Other DBs
NCBI-GeneID:
120689936
NCBI-ProteinID:
XP_039828328
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Position
9N:6009349..6012504
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AA seq
355 aa
AA seq
DB search
MQPDAIAPLHRLARVAAHLNPQMEEDAVALRPAACRAKGGAPGFKVAILGAAGGIGQPLS
MLMKMNPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGAQQLDAALTGMDLVIIPAG
LPRKPGMTRDDLFNKNAGIVRILCEGVARCCPDAIVNLISNPVNSTVPIAAEVFKKAGTY
NPKRLLGVTTLDVVRANTFVAEVLGVNPRDVNVPVVGGHAGVTILPLLSQVTPPSSFTQE
EIKYLTNRIQNGGTEVVEAKAGAGSATLSMAFAAAKFGDACLRAMCGEDGIVECSYVASE
VTELPFFATKVRLGRGGAEEILPLGPLNEFERVGLEAAKKELSESIRKGVAFVNK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccgacgccatcgcccccttgcaccgcctcgcccgcgtcgccgcgcacctcaac
ccgcagatggaggaggacgcggtggcgctgaggcccgcggcgtgccgcgccaagggcggc
gcgccggggttcaaggtcgccatcctgggcgcggcgggcgggatcggccagccgctgtcg
atgctcatgaagatgaacccgctcgtgtccgtgctgcacctctacgatgtcgtcaacacg
cccggggtcaccgccgatatcagccacatggacaccggcgccgtggttcggggcttcctt
ggcgcacagcagcttgatgcagcacttacaggaatggaccttgttatcatacccgctggc
ctccctaggaaaccaggaatgacaagggatgatttattcaacaagaatgccgggattgtt
cgcatactttgtgaaggtgttgccagatgctgtcctgatgcgattgtgaatttgatcagc
aacccagtgaactcaactgtacccattgctgctgaggttttcaagaaagctggaacatat
aatcccaagcgtctccttggagtcacgacacttgatgttgtgagggctaacacctttgtg
gctgaagtgcttggagttaatccaagagatgtcaatgttcctgttgttggcgggcatgca
ggggtaaccatattacccctcctctcccaggtcacccctccaagctcattcactcaggaa
gaaatcaaatatttgacgaaccgcatacagaatggtggcacagaagttgtggaggcaaag
gctggggcaggctctgcaactctgtcaatggcttttgctgctgcgaaatttggtgatgca
tgcttgcgagcaatgtgcggtgaagatggcatcgtggaatgctcatatgttgcgtctgag
gtgacagagctaccgttctttgcaacaaaagtgaggctgggccgtggtggagctgaggag
atcctccctcttggacctctcaacgaatttgaaagagttggcctggaagcggcaaagaag
gaactgagcgagagcattcggaagggcgtcgctttcgtgaacaagtga
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