Panicum virgatum (switchgrass): 120689949
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Entry
120689949 CDS
T07260
Name
(RefSeq) transcription factor RAX2-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120689949
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120689949
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120689949
NCBI-ProteinID:
XP_039828344
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All DBs
Position
9N:6188348..6189986
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AA seq
315 aa
AA seq
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MGRAPCCDKASVKKGPWSPEEDAKLKSYIEQNGTGGNWIALPQKIGLKRCGKSCRLRWLN
YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGK
QSRKDQRQQQQQFMRQATSSDGMKQEAETGDVNGSSGLPAINYNWHQQTIVGPVPGMMME
GHRIRDEVDESIRKLLYKLGGPGPFATLQVPQCVPPMCEGSPSIMLPSCTVDTTSLNEGG
MQGSSTLPALELDQSFHFNQVKLDSLDCFFGMGTDQSMRWSEVSPLVCPNNTVASSSQGL
QPYCHVDEPANLGMK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggagagctccatgctgtgacaaagctagcgtgaagaagggcccgtggtcgccggag
gaggatgccaagctcaagtcctacatcgagcagaatggcactggcggcaactggatagcc
ctgccgcagaagatagggctgaagaggtgtggcaagagctgccgccttcggtggttgaac
tacctccggccaaacatcaagcacggaggattctcagaggaggaggacaggataatcctt
agcctctacatcagcatcggcagcaggtggtcgataatagcggcgcagctgccgggaagg
acagataatgacataaagaattactggaacacgaggctcaagaagaagctcttcggcaag
cagtcccgcaaggatcagagacagcagcagcagcagttcatgcgccaggccacatcaagt
gatgggatgaagcaagaagcagagaccggggatgtaaacggaagcagcggcctgccggcc
atcaattacaactggcaccagcaaaccattgttgggccagtgccaggtatgatgatggaa
ggccatcgcatacgagacgaggtagatgagtcgatccggaagcttctttacaaattagga
ggaccaggcccttttgcgactcttcaggttccgcagtgcgttcctccaatgtgcgaggga
agtccaagcatcatgctgccatcatgcacggtagacaccacctcccttaacgaagggggc
atgcaaggttccagcacattgccagcgctggaactggatcagagcttccacttcaatcag
gtcaagctggatagtctagattgtttctttggcatgggtactgatcagagcatgaggtgg
agtgaggtgagcccattggtttgccctaataatactgtggcttctagctcgcaagggttg
cagccgtactgtcatgttgacgaaccggcaaaccttgggatgaagtag
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