KEGG   Panicum virgatum (switchgrass): 120689999
Entry
120689999         CDS       T07260                                 
Name
(RefSeq) syntaxin-132-like
  KO
K08486  syntaxin 1B/2/3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120689999
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120689999
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120689999
Membrane trafficking [BR:pvir04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    120689999
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   120689999
  Exosomal proteins of other body fluids (saliva and urine)
   120689999
SSDB
Motif
Pfam: Syntaxin SNARE DUF5345 MutS_III Pox_EPC_I2-L1 Vac_Fusion DUF7310 DUF2116 DUF6548
Other DBs
NCBI-GeneID: 120689999
NCBI-ProteinID: XP_039828439
LinkDB
Position
2K:58765744..58769255
AA seq 301 aa
MNNLLTDSFESEEKPERERDVEMGNRNPKDNSDYGLKDFFEEVKDIEMLLDKMSNIVHKL
QEANEESKSVTKASAMKAIKGRMEKDIDEVGKIARNVKVKLEQMDRNNLENRKKPGCGKG
TSVDRSRMSMTIALKKKLKERMNDFQNLRQTIQEEYREVVERRIFTVTGTKPSEEVIDRL
IETGSSEQIFERAIQGRGQILATVEEIQERHDAVMEIEKRLMELQQIFADMAALVDAQGE
ILDNIENQVQNAVNHVVTGTEALRTAKSLQKKSRKCMMIAIIILIIIAVIIVLSILKPWA
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaacaatcttctcacggattcctttgaaagcgaagagaagccagaaagggagagggac
gttgagatggggaatcgaaatcccaaggacaactctgattatggtctcaaagacttcttt
gaagaggtcaaagatattgaaatgcttttggataagatgtccaatatagttcacaagctt
caggaagctaatgaggagtcaaagtcagtcactaaggcgtctgcaatgaaagcgatcaaa
ggccgcatggagaaggacattgatgaagtagggaagatcgcacgcaacgtaaaagtgaag
ttggaacaaatggacagaaataatcttgagaacagaaagaagccagggtgtgggaagggc
acgagcgtagatcgatcaaggatgtcaatgaccattgcattgaagaagaagctgaaagaa
agaatgaacgatttccagaatctaaggcaaaccatacaagaagagtaccgagaagttgta
gagaggaggatcttcacagtcaccggaacaaagccttctgaagaggtgatcgaccgtctc
attgagactggcagcagtgagcagatcttcgagagagcaattcagggacgagggcagatt
cttgcaacagttgaagaaattcaggaacgtcatgatgcagtcatggagattgagaaaagg
cttatggaactgcaacagattttcgcagacatggcagcactcgttgatgcacaaggagag
attctagacaatatagagaatcaggttcaaaatgctgtgaaccatgtggttactggtact
gaagctctacgcactgcaaagagcctgcagaagaaatcaagaaagtgcatgatgattgca
attatcattctgattataattgctgtcatcattgtcctttccattttaaagccttgggct
aagtaa

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