Panicum virgatum (switchgrass): 120690079
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Entry
120690079 CDS
T07260
Name
(RefSeq) meiotic recombination protein SPO11-1-like isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120690079
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
120690079
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GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
EFR3_ARM
Motif
Other DBs
NCBI-GeneID:
120690079
NCBI-ProteinID:
XP_039828530
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Position
9N:complement(7704278..7708628)
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AA seq
395 aa
AA seq
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MARREKRRGAPPLEGDEQRLRRRQEEAGLLLLRIRGLVRWVVEGVATGRSPSIVLHRYRN
YCSAADAASPSHCDCSYDAPVGTDVLSLLHKDCHTSRLNVLLRVLLVVQQLLQQNKHCSK
RDIYYMYPSIFVEVAVVDRAINDICILFKCSRHNLNVVPVVKGLVMGWIRFEEGEKKVYC
ITNVNAAFSIPVSIEAIKVSWCLFRSFPLADVISVAQYILVVEKETVFQRLANDKFCERN
RCIVITGRGYPDIPTRRFLRYLVEQLHLPAYCLVDSDPHGFDILATYKFGSLQLAYDANL
LRVPDIRWLGVFTSDFEDFCLPDCCLLHLSPEDRRKAEGILARCYLHKEAPELRSELEAM
LQKGVKFEIEALSASSISFLSDKYIPEKIKQGRHL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggagggagaagaggaggggtgcaccgccgctagaaggcgacgagcagcggctg
cggcggaggcaggaggaggcggggctcctcctcctcaggatcagagggctcgtgcgctgg
gtcgtcgagggggtcgccaccggccgctccccgtccatcgtgctccaccggtaccggaac
tactgctcggccgccgacgctgcgtccccatcccattgtgactgcagctacgacgccccc
gtcggcacagacgtcctctccctgctccacaaggactgccacacctctcgcctcaatgtg
ctcctgagggtgcttctcgtggtgcagcagctcctgcagcagaacaagcactgctccaag
agggacatctactacatgtacccctccattttcgtagaagtagctgttgttgaccgtgcc
atcaatgatatctgcatactcttcaagtgcagtcggcacaatctcaatgtggttcctgta
gtgaaaggtttggtgatgggctggataagatttgaggagggtgaaaaaaaagtgtattgc
ataacaaacgtcaatgctgctttctccatccctgttagcattgaggcaatcaaagtgagc
tggtgtctttttcgttcttttcctcttgcagatgttattagtgttgctcagtacatactt
gtagttgagaaggaaacagtgttccagcgtttggccaatgacaagttctgtgaaagaaat
cgctgcattgttattacaggaagaggctacccagatattccaacaaggagattcctgcga
taccttgttgaacagctgcatctacctgcttattgcttagtggactcagaccctcatggt
ttcgacattctggccacatataaatttggttccttgcaattggcatatgatgcaaacttg
ctgcgtgtacctgatatacggtggcttggggttttcacatctgactttgaggatttttgc
cttccagactgctgcctgcttcatttgtcacctgaagataggaggaaagctgaaggtatt
cttgccaggtgctatttacacaaggaagccccagaattgaggtcagagttggaagcgatg
ttacaaaagggtgtcaagtttgagattgaggcactatccgcaagctccatttcattttta
tccgacaaatacatccctgagaagatcaaacaaggaaggcatttataa
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