Panicum virgatum (switchgrass): 120690112
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Entry
120690112 CDS
T07260
Name
(RefSeq) myosin-12-like isoform X1
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120690112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120690112
04131 Membrane trafficking [BR:
pvir04131
]
120690112
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120690112
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120690112
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120690112
mRNA cycle factors
P-body specific factors
120690112
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120690112
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120690112
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120690112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
HAMP
AAA_16
AAA_22
AAA_6
nSTAND3
CdiA_helical
TSC22
CbiA
Motif
Other DBs
NCBI-GeneID:
120690112
NCBI-ProteinID:
XP_039828570
LinkDB
All DBs
Position
9N:complement(7996522..8006788)
Genome browser
AA seq
1563 aa
AA seq
DB search
MGTPVNIIVGSHVWLEDPGEAWVDGVVTEIKGRDATIATTNGKTVVASLGSIYPKDTEAP
PSGVDDMTKLAYLHEPGVLHNLSCRYGLNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQY
KGATFGELSPHLFAIADACYRALINDHGSQSILVSGESGAGKTETTKMLMRYLAFMGGRS
GTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKYGKISGAAVRTYLLE
RSRVCQVSDPERNYHCFYMLCNAPPEDVKRFKVGDPRSFHYLNQTNCYEVANVDDAREYI
ETRNAMDIVGIDQDEQDAIFRVVAAILHLGNIDFSKGKEIDSSKLRDDKSVHHLKTVAEL
LMCDEKALEDSLCQRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINNSI
GQDPDATNIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTREEID
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKL
ARTAFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNSSRCPFVANLFPPLPEETSKQS
KFSSIGTRFKQQLQSLMETLSTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAI
RISCAGYPTKRTFDEFIDRFGMLAPELVDSSDEKAACAAICDRMGLKGYQIGKTKVFLRA
GQMAELDARRAEVLANAARLIQRRIKTYLMRKEFVNLRKASVQSQKFWRARLARKLFEYM
RRDAASIRIQKHARGHSARKAYRQVYESAIVIQTGIRAMAARNEHRFRRETKASIIIQTR
WRQHKAYVAYKQQKRASLILQCLWRARIARKELRKLRMEARETGALKEAKDKLEKRAEEL
TWRLDVEKRLRTDLEEAKGQEIGKLQSALQEMQEKIEEAHAAVLKEKEAAKLAIEQAPPK
IVEVPVVDTEKVEQLTSKNKELEDELSTFRQKAEDLENKLLEMQKRSDELSQETQEQESK
VNQLQEMIERLETSLSNMESENQVLRQQSLVVATADEDKSKQIERLESKIAILESEIQLL
RSNSAPAVQAVVTPEMYQTSVMENLIHMEVDNGHQLEEAKIVNEQVVVPPVKNLSKQKSL
TDRQQENHDVLIKSLVEDRRFDAKKSAAACIVYKSLLRWRSFEAEKTNIFDRIIQTIRSS
VEGAESSGELAYWLSTTSTLLYLLQNTLKASSSSSKGSNRSRTATGSLFSRMVQSARTSS
SGLGITSGYGGMVGRPDTASMVEAKYPALRFKQQLTAYVEKIYGIIRDNLKKEISPFLTL
CIQAPRANRVRPSRGSLKSIHSNALSRQASSVHWQSIVKCLENTLETMKNNHVPPMIIKK
TFSQVYAYLNVQLFNSLLLRRECCSFSNGEFLKAGLQELEQWYSRTTEEYAGASWDELQH
IRQAVGFLVLHQKSHKTLEEITNELCPVLSITQIYRIATMFWDDKYGAQGLSQEVIGKMR
MMTTDDSITTPNSSFLLDDDSSIPISLDDIAHLMLDIDPLDVEPPALLRQNSQFHFLLQQ
HTD
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggggacgccggtgaacatcatcgtcggctcgcacgtgtggctggaggaccccggcgaa
gcctgggtcgacggcgtcgtcaccgagatcaaaggccgcgacgccaccatcgccaccacc
aatggcaaaacggttgtggcgagccttggtagcatataccccaaggacacggaggcgccg
ccttcgggagtggacgacatgacgaagctggcgtacctccacgagccaggggtcctgcac
aacctctcttgccggtacggcctcaacgagatatacacctacaccgggaacatcttgatt
gcggtgaaccctttccagaggctgcctcatctctatgacgtgcacatgatggagcagtac
aagggcgccacctttggggagctcagcccccatctcttcgctatcgcagatgcctgttac
agggcgctgatcaatgatcacgggagccagtccatattggtgagtggtgagagtggtgct
ggtaagacggagacgacgaagatgctcatgaggtatcttgcattcatgggaggaaggtcc
ggtacggaggggcgtactgttgagcaacaggttctagagtctaacccagtacttgaagca
tttggcaatgcgaagacagtaaagaacaataactcaagtcgttttggtaagtttgttgaa
attcaattcgacaagtatgggaagatatctggggctgctgttcgcacgtatctccttgaa
cgatcacgagtatgtcaggtctctgatcctgagaggaactaccattgcttttacatgctt
tgtaacgcaccccctgaggatgtaaagagatttaaggtgggagacccaagatcattccat
tacttgaaccaaacgaactgctatgaagtagcaaatgtggacgatgcaagagaatacata
gaaaccagaaatgcaatggatattgttggcattgatcaagatgaacaggatgcaatcttc
agagtagtagcagcaattcttcacttagggaatattgacttctccaaagggaaggaaatt
gattcatccaagttgagagatgataaatcagtccatcacctgaaaacagtcgcagaactg
cttatgtgtgacgagaaggcccttgaagactccctttgccagcgagtcattgtaacacct
gatggaaatatcacgaaacccctcgatccagattctgctgcattaagtcgtgatgcctta
gcaaagacagtatattcaagactgtttgactggattgtagacaagatcaataattcaatt
ggtcaggatccagatgcgaccaatataataggcgtgcttgatatctatggattcgagagc
ttcaagattaacagttttgagcagctatgtatcaatttgacaaacgagaagttgcaacag
cacttcaaccagcatgtgtttaagatggagcaagaggaatacacaagggaggaaatagac
tggagctatgttgaatttgtagacaatcaggatgtgctggacctgattgagaagaaacct
ggaggaataattgctcttctggatgaggcatgtatgtttccaaagtccactcatgaaaca
tttgcccaaaagatgtaccaaacatacaaggcacataagcgcttcagcaagcccaaactt
gctcgcactgcctttacaatcaaccactatgcaggagatgtcacatatcaagcagatcag
ttccttgataagaacaaagactatgtggtagctgaacaccaagctctactaaattcttca
aggtgcccttttgttgcaaatctctttcctccattacctgaggagacttctaaacagtcc
aaattctcttcaatcggtactcgctttaagcaacaacttcaatccctcatggaaacactg
agtacaacagaacctcactacattagatgtgtgaagcctaatactgtactaaaaccaggc
atctttgagaatttcaacgtcttgaatcaattgagatgtgggggtgttctggaagcaatc
aggatcagctgtgctggctatccaacaaagaggacatttgatgagttcattgatcggttt
gggatgcttgcaccagagcttgtggacagctctgatgagaaggccgcctgtgcagcaata
tgtgatagaatgggtttgaaaggatatcagatagggaaaacaaaggtattcttaagagct
ggtcagatggcagagttggatgctcgaagagcagaagtattggccaatgctgcgcgacta
atccagaggcgtataaagacatatcttatgcgaaaggaatttgtcaacttacgaaaagcc
tcagttcaatctcagaagttctggagagcacgactagctagaaagctttttgagtatatg
agaagagatgctgcttcaattaggatacaaaagcatgcacgaggccattctgccagaaaa
gcataccgtcaagtatatgaatcagctatagtaatacagacaggaatacgggcaatggca
gctcgcaatgaacacaggttccgaagagagaccaaggcttccataattatccagactcga
tggcgccaacacaaagcttatgttgcttataagcagcaaaagagagcttcattgattctt
cagtgcttgtggagggcacgcatcgcaagaaaggaacttcggaaactgagaatggaagca
agagagaccggcgcactcaaagaagctaaagacaagcttgaaaagagagcagaagaactt
acatggcggttagatgttgaaaagcgtttgaggactgaccttgaagaagccaagggccaa
gaaattggaaagttgcaatctgcattgcaagaaatgcaagaaaagattgaggaagcccat
gcagcagtattaaaggagaaagaagccgcgaagttagcaattgaacaggcaccaccaaag
atagtagaagtgccagttgtggacactgaaaaagttgaacaattgacaagtaaaaataaa
gaacttgaggatgaactaagtacatttagacagaaggctgaagatctagaaaataagctt
cttgagatgcaaaaacggtctgacgaattgtcacaggagacacaagaacaagaatccaaa
gttaatcaacttcaagagatgattgaaaggcttgaaacaagtttatccaatatggaatct
gaaaaccaggttctacgacaacaatctttggtcgttgcaacagcagatgaggataaatca
aaacagatagagagactggaaagcaagattgccatcttagagtcggagatccagttgctc
cgcagtaattcagcgcctgctgttcaggccgtggtcacccctgaaatgtatcagacatca
gtaatggagaacctcattcatatggaagttgacaatggacaccagcttgaagaagctaaa
atagtcaatgaacaggtggttgttcctcctgtaaagaatctaagcaaacaaaaatcactg
acagatcgacagcaagaaaatcatgatgtcctgattaaaagtcttgtagaagacaggaga
tttgatgccaaaaaatcagctgcagcatgcattgtctacaaatcactcctgcgctggcgt
tcatttgaagcagagaagactaacatatttgatcgaatcatccaaacaattaggtcatca
gttgagggtgctgaaagttctggagagctagcttattggttgtcaactacatcaactctc
ctctacttattacaaaataccctcaaagctagcagttcatcaagtaaaggatcgaatcgc
agccggactgcaacaggcagcctgtttagtagaatggtgcagagtgcccggacatcatca
tcaggattaggcataactagtggatacggtggaatggtaggaaggcctgacactgcatca
atggtagaagcaaagtatccagcacttcggttcaagcaacagttaacagcatacgttgag
aagatatatgggataattagagataacctgaagaaagaaataagcccattcttgactcta
tgcatacaggctccaagagctaatcgcgtgagaccatctcggggttcactaaaaagtata
cactctaatgcactatcaaggcaagcatcaagtgtacattggcaaagcatagttaagtgc
ctggaaaatacactggaaacaatgaaaaataaccatgtacctccgatgataatcaagaaa
acatttagtcaagtatatgcatacttgaatgtgcaactcttcaacagtttgctacttcgt
cgggaatgctgctcttttagcaatggggaattcttgaaggctggcttacaagaactggag
caatggtactctagaacaactgaagagtatgcaggggcatcttgggatgaactgcaacac
ataaggcaggcagttgggttcctggtgctgcatcagaagtcacacaaaaccctggaggaa
atcacaaatgagctttgccctgttttgagcataactcaaatctatcgcatagcaacaatg
ttctgggacgacaaatatggtgcacaaggtctatctcaagaggtcattggaaagatgaga
atgatgacaacagatgattcgataactactccaaatagttctttcctgctagatgatgat
tcaagcatacctatatccttggacgatatagcacatctgatgcttgacattgacccatta
gatgtggaaccgccagcattactgaggcaaaactcgcagttccacttccttctgcagcag
cacacagactga
DBGET
integrated database retrieval system
