Panicum virgatum (switchgrass): 120690158
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Entry
120690158 CDS
T07260
Name
(RefSeq) GDP-mannose 3,5-epimerase 1
KO
K10046
GDP-D-mannose 3', 5'-epimerase [EC:
5.1.3.18
5.1.3.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00053
Ascorbate and aldarate metabolism
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
pvir01250
Biosynthesis of nucleotide sugars
Module
pvir_M00114
Ascorbate biosynthesis, plants, fructose-6P => ascorbate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
120690158
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120690158
Enzymes [BR:
pvir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.18 GDP-mannose 3,5-epimerase
120690158
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
NAD_binding_10
Polysacc_synt_2
RmlD_sub_bind
NmrA
adh_short
Motif
Other DBs
NCBI-GeneID:
120690158
NCBI-ProteinID:
XP_039828630
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Position
9N:complement(29422140..29425956)
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AA seq
380 aa
AA seq
DB search
MGSSEKTVTAYGEYTYAELEREPYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD
WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTQGVDHVFNLAADMGGMGFIQSNHSVIMYN
NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKL
ATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTERFEMWGDG
LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDRKLPIHHIPG
PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKIQGIDIAAYGSSKVV
STQAPVQLGSLRAADGKEGL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagcgagaagactgttactgcttatggcgagtacacctatgctgagctggag
agggagccctactggccaagtgagaagttgaggatttcgattactggggctggtggtttc
attggatcccacattgctcgccgtctgaagagcgagggccattatatcattgcctctgac
tggaagaagaatgagcacatgaccgaggacatgttctgccatgagttccacctggttgat
ctcagggtcatggacaactgtctgaaggttacccaaggcgtcgatcatgtattcaatctt
gctgctgatatgggtggcatggggttcatccagtcaaaccactctgtcatcatgtacaac
aacaccatgatcagtttcaacatgctagaggctgcacgtatcaatggtgtgaagaggttc
ttctacgcctccagtgcatgcatttaccctgaattcaagcagcttgacacaaatgtgagc
ctgaaggaatccgatgcctggcctgctgagcctcaagacgcctatggcttggagaagctt
gcaactgaggagttgtgcaagcactacaccaaggactttggcatcgagtgccgcattggc
cgtttccataacatctatggtcccttcggtacatggaaaggtggtcgtgagaaggcacct
gctgccttctgcagaaaagctcagacatcaaccgagaggtttgagatgtggggcgatggc
ctccaaacccgatccttcactttcatcgacgaatgcgtcgagggtgttctaagattgacc
aagtccgacttccgcgagccagtgaacattgggagtgacgagatggtgagcatgaacgag
atggctgagatcgtgctgagctttgaggataggaagctgcccatccaccacatccctggt
ccagagggtgtccgcgggcgcaactctgacaacacccttatcaaggagaagctcgggtgg
gctccgacaatgaagctcaaggacgggcttcggttcacctacttctggatcaaggagcag
atcgagaaggagaagatccagggcatcgacatcgcggcgtacgggtcctctaaggtggtg
tcgacccaggcgcccgtgcagctgggctccctccgcgccgccgacggcaaggagggcctc
tga
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