Panicum virgatum (switchgrass): 120690218
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Entry
120690218 CDS
T07260
Name
(RefSeq) single myb histone 6 isoform X1
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120690218
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120690218
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Gene cluster
GFIT
Motif
Pfam:
Linker_histone
Myb_DNA-binding
HTH_Hrp3
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120690218
NCBI-ProteinID:
XP_039828732
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Position
9N:15367964..15376552
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AA seq
321 aa
AA seq
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MGVPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIV
STSSSRDKGKTAVKKTRTIPKNNEHTTAISTVTSDIDDEIVDDKPLASVPSEAQNAPNPK
KAHSRLDNIIMEAIKSLNEPTGSHRTTIANYIEEQYWPPSDFDPLLSAKLKDLATSGKLI
KVNRKYRIAPSSPNSEGRSPKMLLLEDVQREPIKIGSNDSKTLTRSQVDSELACMATMTA
EEASGAAARAVAEAEAIMAEAEAAAREAEAAEADAQAAQAFAEAAFLTLKNRNAAKLATC
PATVCSRDADVAVVLRAHKEG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggggttccaaaacagaggtggacatctgaggaagaagctgcgcttagagctggaata
gcgaggcatggagttggaaaatggcgcacaatattgaaagacccagaatttagttccacc
ttgtgctaccgctcaaatgttgacctcaaggacaaatggcgcaacatgaatgtaattgtc
agtacatcgagttctcgtgacaagggaaagactgcagtgaagaaaacacgaacgattccc
aagaataatgaacacaccacggcaatcagcacagttacttctgatattgatgatgagatt
gttgatgacaagcctttagcatcagtgcctagtgaagcacagaatgcaccgaatccaaag
aaagctcactcaagactggataatattataatggaggctataaagagcttaaatgagcct
acagggtctcacagaactactattgctaattacatagaggagcaatattggccgcctagt
gattttgatcccttactatctgcaaaactgaaggacttagccaccagtggcaaattgata
aaggtgaatcggaagtacaggatagcaccgagctcgcctaattcagagggccgaagcccc
aaaatgcttctgttagaagacgtgcagagagagcccatcaaaatagggagcaatgatagt
aaaacccttacgagatctcaagttgattctgaattggcatgtatggcaaccatgactgct
gaggaagcttcaggggctgctgctcgtgcagttgctgaagcagaggctatcatggcagaa
gctgaagcagcagcgagagaagcagaggccgcagaagcagacgcccaagctgctcaagcc
tttgctgaagcagcatttttgacattgaagaacagaaatgctgcaaaattggcgacatgt
ccagcaactgtgtgtagcagagatgcggatgttgcggtggttttgcgggcacacaaggag
ggataa
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integrated database retrieval system
