Panicum virgatum (switchgrass): 120690239
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Entry
120690239 CDS
T07260
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120690239
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120690239
Peptidases and inhibitors [BR:
pvir01002
]
Serine peptidases
Family S54: Rhomboid family
120690239
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
Motif
Other DBs
NCBI-GeneID:
120690239
NCBI-ProteinID:
XP_039828755
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Position
9N:complement(56721100..56723238)
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AA seq
335 aa
AA seq
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MAAARYDVEQGGRGGEGKYPPPPEQMYPQREGEREWVPWFVPVVVAANIALFAVVMYVNN
CPAHAASTRRGGGGGGGACVARGFLHRFAFQPLSENPLLGPSSAALQKLGALVWDKVVHE
HQGWRLLTCIWLHAGVVHLLANMLSLVLVGLKLEQQFGYLRIGVIYIVSGVGGSVLSSLF
IRNNISVGASGALFGLLGAMLSELFTNWTIYSNKAAALVTLLVVIAINLAIGILPHVDNF
AHIGGFLTGFLLGFIFLMRPHYGWMQRYVRPSDIKYTTRKYLPYQWVLLAVASVLAVLGF
AVGMGMLFKGVNANDHCQWCHYLSCVPTSRWSCGK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgcgctacgacgtggagcagggcgggaggggcggggaggggaagtacccg
ccgccgccggagcagatgtacccgcagcgggagggggagagggagtgggtgccctggttc
gtgccggtcgtcgtggccgccaacatcgctctcttcgccgtcgtcatgtacgtcaacaac
tgccccgcccacgccgcctcgactcgccgcggcggcggcggcggcggcggcgcctgcgtc
gcgcgcgggttcctccaccgcttcgccttccagccgctcagcgagaacccgctcctcggc
ccatcgtcggcggcgctgcagaagctgggagcacttgtgtgggacaaagttgtgcacgag
caccagggttggaggctcctgacgtgcatctggctgcacgccggcgttgtccacctgcta
gccaatatgctcagcctcgtgctcgtcggactcaaactcgagcaacaatttggatatctg
agaatcggtgtcatctacattgtttctggcgttggaggcagcgtgctttcatctctgttc
atcaggaacaacatctctgttggcgcttctggagccctctttggactccttggagccatg
ctgtcggagctcttcaccaactggacaatctactcaaacaaggctgcagccctggtgacc
ctcttggtcgttatcgccatcaacctcgccatcggcatcctcccgcacgtcgacaacttt
gcgcacatcggaggattcctcactggtttcctcctgggattcatcttcctgatgcgcccg
cattacggttggatgcagcgctatgtccggccctcggacatcaagtacaccaccaggaag
tacctgccctatcaatgggttctgttggccgtagcttcggtcctcgctgtcctcggattc
gccgttgggatggggatgcttttcaagggagtgaacgcgaacgaccactgccagtggtgc
cactacctcagctgcgtcccgacatctagatggagctgtgggaagtga
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