Panicum virgatum (switchgrass): 120690264
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Entry
120690264 CDS
T07260
Name
(RefSeq) 26S proteasome regulatory subunit 4 homolog
KO
K03062
26S proteasome regulatory subunit T2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120690264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120690264
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
120690264
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
DUF815
nSTAND3
AAA_16
AAA_2
AAA_5
RuvB_N
AAA_lid_PRS2_C
ATPase
TIP49
AAA_3
RNA_helicase
NPHP3_N
AAA_24
AAA_28
Sigma54_activat
AAA_25
TsaE
Mg_chelatase
IstB_IS21
Parvo_NS1
MCM
AAA_7
NACHT
AAA_14
Motif
Other DBs
NCBI-GeneID:
120690264
NCBI-ProteinID:
XP_039828794
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All DBs
Position
9N:complement(68005616..68009023)
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AA seq
447 aa
AA seq
DB search
MGQGTPGGMGKQGGLPGDRKPGDGGKKEKKYEPPAAPSRVGRRQKRQKGSEAAARLPAVA
PLSKCRLRLLKLERVKDYLLMEEEFVASQERLRPTEDKAEEDRSKVDDLRGTPMSVGSLE
EIIDESHAIVSSSVGPEYYVGVMSFVDKDQLEPGCAILMHNKVLSVVGILQDEVDPMVSV
MKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKT
LLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTK
RYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEF
PLPDVKTRRRIFQIHTSKMTLADDVNLEEFIMSKDEFSGADIKAICTEAGLLALRERRMK
VTHADFKKAKEKVMFKKKEGVPEGLYM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaggcactcccggcgggatggggaagcagggcggcctcccgggcgaccgcaag
cccggcgacggcgggaagaaggagaagaagtacgagcctcccgccgccccatcccgtgtc
ggccggaggcagaagcggcagaagggctccgaggcggcggcgcgcctccccgccgtggcg
ccgctctccaagtgccgccttcgtctcctcaagctcgagcgcgtcaaggactacctcctc
atggaggaggagttcgtcgccagccaggagcgcctgcgccccaccgaggacaaggcggag
gaggaccgatccaaggtcgacgacctgcgaggcacccccatgagcgtcggctcgctcgag
gagatcatcgacgagagccacgccatcgtctcctcgtccgtcgggccagagtactacgtc
ggggtgatgtccttcgtcgacaaggaccagctcgagcctggatgcgccatactgatgcac
aacaaggttctgtccgtggttggtattttgcaagatgaagttgatcctatggtttctgtg
atgaaagtcgaaaaggcacctctggagtcctatgctgatattggtggcttagatgctcag
attcaagaaatcaaagaagcagtcgaacttcccttaacacatcctgagctatatgaggat
attggaatcaggcctcccaagggagtcatattatatggagaacctggaaccgggaaaact
ctactcgcaaaggcagttgccaattctacatcagcaacattcttgcgtgttgttgggagt
gagttaatccaaaagtaccttggtgatggtcccaagcttgtaagagaattgttcagggtg
gctgatgatctttctccttcgattgtatttattgatgagattgatgcagttgggacaaag
aggtatgatgctcattcaggaggagagcgtgagattcagagaaccatgttggagttgtta
aaccagctggatggttttgattcaagaggagatgttaaagttattctagctacaaatcgc
atcgaaagtcttgacccagccttgcttcgaccaggtcgaattgacaggaagattgaattc
cctttaccagatgtaaagaccaggcggcgcatcttccagatccacacatcaaagatgacc
ttggctgatgatgtaaacctagaagagtttatcatgtcgaaagatgagttttcaggtgct
gatatcaaggcaatttgtactgaagctggcttgcttgctttgagagagcgtcggatgaag
gtgacgcatgcagacttcaagaaagccaaagaaaaggtcatgttcaagaagaaagaaggt
gtgccggagggcctctacatgtga
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