Panicum virgatum (switchgrass): 120690295
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Entry
120690295 CDS
T07260
Name
(RefSeq) alpha-mannosidase-like
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120690295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120690295
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
120690295
Membrane trafficking [BR:
pvir04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
120690295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
DUF7543
Motif
Other DBs
NCBI-GeneID:
120690295
NCBI-ProteinID:
XP_039828828
LinkDB
All DBs
Position
9N:45223439..45234133
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AA seq
1011 aa
AA seq
DB search
MAAALLLLVVLAAALAVTEASASAFAAASNNATAPPPTVVAGKLNVHLVPHSHDDVGWLK
TVDQYYVGSNNTIQGACVMNTLDSVVDALARDPARKFVVVEQAFFQRWWAEKSPTIQAIV
HKLVDSGQLEFINGGWCMHDEAAVHYIDMIDQTTLGHRMIKKQFNKTPRAGWQIDPFGHS
AVQAYLLGAELGFDSVHFARIDYQDRAKRKADKGLEVIWRGSRTFGSSSQIFTNAFPVHY
SPPDGFGFEVLDESIIPVQDDLSLFDYNVEERVNDFVAAAIAQANVTRTNHIMWTMGDDF
NYQYAESWFRNMDKLIEHVNKDGRVHALYSTPSIYTDAKHASNESWPVKYDDYFPYADST
NAYWTGYFTSRPTFKRYVRAYSGYYLAARQIEFLVGRSSLGLFTSSLEDAMGIAQHHDAV
SGTAKQHTTDDYSKRLALGASKVENGVNTALTCLTNSNRTCVSSVTKFEQCPLLNISYCP
STEKASSSTKSLVVVVYNPLGWERSDFIRIPVNDENLAVKNSVGTIVESQLVEVDNVTGN
LRKFYVKAYLGITSDKAPKYWLVFQASVPPMGWNSYYISKPTGAAYNGTGYASAVVSPSN
DTIEVGPGPLKMSFSAASGQLKRMFNSISGVDLPIQQSFLWYRSSEGDSMDSQASGAYIF
RPDGNTPTTVSSSVPLKVIRGPLVDEVHQQFSSWVYQITRLYKNKEHAEVEYTIGPIPVD
DDIGKEVITRMTANMVTNSTFYTDSNGRDFLKRVRNFREDWDLQVTQPVAGNYYPVNLGL
YIADGNYELSVLVDRAVGASSIQDGQLEIMLHRRMLKDDARGVGEPLDEVVCVGKDCQGL
TARGTYYVNVEKIGHGAHWRRTYGQQVYSPFLLAFTHEEETEWKSYSVPKASMMDANYSL
PDNVAIVTLQNLDDGTTLLRLAHLFQAAEDPQYSVLTKVDLRKVFGKRTIKELTETNLSA
NQKKSDMKKLNWKVVGDTENGPAPIKGGPVDSQALVIELGPMEIRTFLLKF
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcacttctcctgctggtggtgctggcagcggcgctcgcggttacggaggcg
tcggcgtcggcgttcgcggcggcgtcaaacaacgcgacggcgccgccgccgacggtggtg
gcgggcaagctgaacgtgcacctggtgccgcactcgcacgacgacgtcggctggctcaag
accgtcgaccagtactacgtcggctccaacaacaccatccagggcgcctgcgtcatgaac
acgctcgactccgtcgtcgacgcgctcgccagggaccccgcccgcaagttcgtcgtcgtc
gagcaggctttcttccaaaggtggtgggcagagaaaagcccgacaatccaagccatagtc
cacaagctggtcgattcgggtcagctagagttcataaatggtgggtggtgtatgcatgat
gaagctgctgtacattacattgacatgattgatcagaccacacttggtcaccggatgatt
aagaaacagttcaacaagactccaagagctggctggcaaattgatccttttggccattct
gcagttcaagcatatttgcttggagcagagcttggttttgattctgtacatttcgcaaga
attgattaccaagatagggcaaagaggaaagcagataaaggcctagaggtcatatggcgc
ggctcaagaacttttggttcatcttcacagatcttcaccaatgcatttcctgtccattat
agcccaccagatggctttggctttgaagttttggatgaaagtatcatacctgttcaggat
gacctgtcactttttgactataatgtcgaagaacgtgtgaatgattttgttgctgcagca
atagcacaggcgaatgttacacgtacaaatcatatcatgtggaccatgggggatgatttt
aactaccagtatgctgaatcctggttccggaatatggacaaacttattgaacatgtgaac
aaggatggccgagtgcacgcactgtattctactccctccatctacacagatgccaaacat
gcatcaaatgaatcgtggccagtaaaatatgatgattattttccctatgctgattcaaca
aacgcatattggactgggtattttacaagccgtccaacattcaagcgatatgttcgagcg
tacagtgggtattacctggctgctcgtcaaatagaatttttggtgggtagaagttcctta
ggattatttacttccagcttggaagatgcaatgggaattgcccagcatcatgatgcagtc
tcaggtactgcgaaacagcacacaactgatgactactcgaaacggctcgctcttggagca
tcaaaggttgaaaatggtgtcaacactgctctgacttgtcttacgaactccaacagaaca
tgtgtgtcatctgtaacaaaatttgaacagtgtccacttctgaatataagctactgccct
tcaactgagaaagcaagttcctcaacaaagagtctagttgtagttgtttacaatcctctt
ggatgggaacgtagtgacttcataaggattcctgtaaatgatgaaaacctagctgtaaaa
aactctgttggaactattgttgaatctcaactggttgaggttgataacgtgaccggcaat
ttaaggaagttttatgtgaaggcttatcttggaatcacatcagacaaggcccctaagtat
tggctagtatttcaagcttccgtaccaccaatgggatggaattcttactatatttcgaaa
cccactggagcagcatacaacggtactgggtatgcctctgcggtggtttctccaagtaac
gatacgattgaagttggaccagggcctctgaagatgtccttttcagcagcatctggacaa
ctcaagaggatgttcaattccatctcaggagtggatttaccaattcaacaaagcttcctt
tggtatagatcaagtgaaggtgattccatggactcacaggcatctggagcttatattttt
agacctgatggtaacacgccaactactgtttcatcatcggtgccactgaaagttatccgt
ggacctctggtcgatgaagtgcatcaacaattcagctcatgggtatatcagataacacga
ctctacaagaataaggagcatgccgaagttgaatacacgattggaccaatccctgtcgat
gatgacataggcaaggaggttatcacacgaatgacagcaaatatggtcacgaacagtaca
ttttatactgattcaaacggaagggatttcctcaaaagggtgagaaacttcagggaagat
tgggatcttcaagttactcaacctgttgcaggaaattactacccggttaatctgggactg
tatatagccgatggaaactatgaactatctgtacttgttgatcgtgctgttggagcatca
agtatccaggatggtcagctagagattatgctacacaggcgtatgcttaaagatgatgct
cgaggtgttggagaaccactagatgaagttgtttgtgtgggtaaagattgccaggggctc
acggccaggggcacttactatgtcaatgtcgaaaagatagggcatggagctcattggcga
cgtacatacggccagcaagtctattcgcccttcctccttgcttttactcatgaggaggag
acagaatggaaatcctacagtgttcctaaagctagcatgatggatgcaaactacagtctt
cctgataatgtcgcaatcgtcactttgcagaatctagatgatggtaccacactactccgc
ttggcccatcttttccaggctgctgaggaccctcaatattcagtgctaacaaaagttgat
ctgagaaaggtgttcgggaagagaactattaaggaattgaccgagactaacctttctgca
aatcaaaagaagtcagatatgaagaaactcaactggaaggttgtcggggacactgaaaat
ggtcccgctccaataaaaggcggcccggttgatagtcaagctctggttattgagctcgga
cccatggagatacgcacgttcttgctgaaattttaa
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