Panicum virgatum (switchgrass): 120690367
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Entry
120690367 CDS
T07260
Name
(RefSeq) polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120690367
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120690367
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120690367
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120690367
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Prominin
Motif
Other DBs
NCBI-GeneID:
120690367
NCBI-ProteinID:
XP_039828934
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Position
9N:complement(12341065..12346081)
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AA seq
589 aa
AA seq
DB search
MAIRAGRRSALVALAFLLAASPCLQARVDQLYHGRQVSDWSRQLNFELQNLSSSQKDGRH
LLASPQEITHRKLRARTGVRKKMEVVQQDDEALVKLENTGIERSKAVDSAVLGKYSIWRR
ENENEKADSRVRQMRDQMIMARIYSVLAKSRDKLDLYQELLTRLKESQRSLGEATADAEL
PKSALERMKAMGQVLSKARDLLYDCKAITERLRVMLLSADEQVRSLKKQSTFLSQLAAKT
IPNGIHCLSMRLTIDYYLLSPEKRKFPNSENLENPNLYHYALFSDNVLAASVVVNSTIMN
AKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWLNSSYCPVLKQLESA
AMKEYYFKADRPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQ
RDLTGLWEVDLNGNVNGAVETCGESFHRFDKYLNFSNPNISQNFDPNACGWAYGMNMFDL
EEWKRKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPTIE
RSEIDNAAVIHYNGNMKPWLEIAMTKYRPYWTKYINYEHSYIHGCKISQ
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgattagggctggccgccgctccgccctcgtcgcccttgccttcctcctcgcggcc
tccccctgcctgcaagccagagtggatcaactttatcatggaagacaggtatccgactgg
agtaggcaactcaactttgaactgcaaaatttgtcctcaagtcaaaaggatggtcgtcat
ctcctggcaagtccacaagagataacacacaggaaattaagggcaaggactggtgtcagg
aagaaaatggaagtagtgcagcaggatgatgaagccctagtgaaacttgagaacacaggt
atagaacgctcgaaagctgttgattctgctgttctgggaaaatatagcatatggagacgt
gaaaatgaaaacgagaaggcagattcaagggttcgtcagatgagagatcaaatgatcatg
gctagaatatattctgtgcttgccaaatccagggacaagcttgatctttatcaggaactg
ctcacaaggctcaaggaaagccagcgctcccttggggaagctactgctgatgctgaactt
ccaaagagtgcgttggagagaatgaaagcaatgggtcaagttctgtcaaaagctagggat
ttattgtatgattgcaaggctattaccgagcgtttaagagtgatgcttctgtcagctgat
gagcaggtccggagcttaaagaagcagagcaccttccttagccagttagcagctaagaca
attccaaatggcatccattgtctatccatgcgcctaacaatagactattaccttctctct
ccagagaaaagaaagttccctaatagtgagaacttggaaaatcccaatctttatcattat
gctcttttctcagacaatgttttggcagcatcagttgtggtcaactcaaccatcatgaat
gcgaaggagcctgaaaaacatgtatttcatctggttactgacaagttgaactttggagct
atgaacatgtggtttttgctgaatccacctggggatgcaacaatccatgttgaaaatgtt
gatgactttaaatggttaaactcctcttattgtcctgttctgaagcagcttgagtctgca
gccatgaaagagtactatttcaaggctgatcgtccaaaaacactctctgctggttcctct
aatcttaagtatcgaaacccaaaatatctgtccatgctcaaccatctaagattttacctc
cctcaagtctatcccaagttgaacaaaatccttttcctggatgatgacatagttgtccag
agggatctgactggactctgggaggttgatcttaatggaaatgtaaatggagcggtggaa
acatgtggagagagctttcaccgatttgacaagtacctcaatttctcaaatccaaatatt
tctcagaattttgaccctaatgcatgcggttgggcttatggaatgaacatgttcgatctg
gaagaatggaagaggaaagatattactgggatttaccacaaatggcagaacatgaacgaa
aacaggctgctctggaaattgggcacactgccaccaggtcttctaactttctacaagctg
acacaccctctggataaatcatggcatgtgcttggcctagggtataacccaaccattgag
cgctcagaaatagacaatgccgcagtcatccactacaatgggaacatgaagccctggctg
gagattgcaatgactaagtaccgaccttactggacaaagtatatcaattatgagcattcc
tatattcatggatgcaaaatcagccaatag
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