Panicum virgatum (switchgrass): 120690393
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Entry
120690393 CDS
T07260
Name
(RefSeq) ABC transporter I family member 6, chloroplastic-like
KO
K09013
Fe-S cluster assembly ATP-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120690393
Transporters [BR:
pvir02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Orphan ABC ATPase
120690393
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_25
AAA_15
AAA_18
AAA_13
DUF87
Motif
Other DBs
NCBI-GeneID:
120690393
NCBI-ProteinID:
XP_039828968
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All DBs
Position
9N:65247435..65251927
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AA seq
307 aa
AA seq
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MAPPLSAAAVAVSSSSPLFSPSSSHPLIRRHAPPRYVSMRTRGRSQPAAAAAESSGSPLL
EVRGLTASVKETGQQILAGVDLTIREGEIHAIMGKNGSGKSTLTKVLVGHPHYEVTGGTI
LFKGEDLIDMEPEERSLAGLFMSFQAPIEIPGVSNFDFLLMAVNARREKSGLPALGPIEF
YSVVSPKVDALKMDPKFLDRNVNEGFSGGERKRNEILQLSVIGADLALLDEIDSGLDVDA
LEDVAIAVNGLLTPQNSVLMITHYQRLLDLIKPSYVHIMENGKIIKTGDSSIATQINEGG
FKSIALV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcccctctccgccgccgccgtggccgtatcctcctcgtcgcccctcttctcg
ccctcttcatcccaccccctcatccgccgccatgcgcctccgagatatgtctccatgcgg
acgcgtggccgttcgcagcccgcggcggcggcggccgagtcctccggcagcccgcttctc
gaggtgcgaggtctcaccgcatccgtgaaggagaccggtcagcagatcctcgccggcgtc
gacctcaccatccgcgagggcgagattcatgcgatcatggggaagaacggctccggcaag
agcaccctcacaaaggttcttgttggccatccgcattatgaggtaactggtggcaccatt
ctcttcaagggggaggacttgattgacatggagccagaggaaagatctctcgcaggcctt
tttatgagtttccaagcacctattgagattcctggcgtgagcaattttgattttctgctc
atggcagtcaatgctcgcagagaaaagagtggtctaccagcattgggtccaattgagttt
tattcagttgtatcacccaaagttgatgccttgaagatggatccgaagttccttgatcgc
aatgtgaatgaaggttttagtggtggtgaaaggaagcgcaacgagatattgcaactttca
gtcattggagcagatttagctcttcttgatgagatagattcaggattagatgttgatgca
cttgaagatgtagctattgcggtgaatgggcttttgacaccccaaaactctgttctgatg
attacgcattaccaacgtcttttggatctcattaaacccagctatgttcatatcatggaa
aatggcaagataatcaagactggtgacagttctattgccactcaaattaatgaaggtggc
ttcaaatcaattgcccttgtatag
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