Panicum virgatum (switchgrass): 120690396
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Entry
120690396 CDS
T07260
Name
(RefSeq) 30S ribosomal protein S1, chloroplastic-like
KO
K02945
small subunit ribosomal protein S1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120690396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvir03011
]
120690396
Ribosome [BR:
pvir03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
120690396
Bacteria
120690396
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
120690396
NCBI-ProteinID:
XP_039828972
LinkDB
All DBs
Position
9N:66361312..66366060
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AA seq
402 aa
AA seq
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MASLAQHVAGLPCPPLSGASRRRPAAPRRPPSALVCGTYALTKEERERERMRQQFDEASE
RCRTAPMEGVAFSPEDLDTAVESTDIDTEIGSLIKGTVFMTTSNGAYIDIQSKSTAFLPL
DEACLLDIDNVEDAGIRPGLVEEFMIIDENPSDETLILSLQAIQQELAWERCRQLQAEDV
VATGKVIGGNKGGVVALVEGLKGFVPFSQVSSKTTAEELLGKELPLKFVEVDEEQGRLVL
SNRKAMADSQAQLGIGSVVLGTVESLKPYGAFIDIGGINGLLHVSQISHDRVADISTVLQ
PGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIFRQRIAQAEA
MARADMLRFQPESGLTLSSEGILGPLSSDSPSEDSGEEPTDE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctggcgcagcacgtcgcgggcctcccatgcccgcctctctccggcgcgtcg
cggcgccgcccagcggcgccgaggcggccgccttcggcgctggtgtgcgggacgtacgcg
ctaaccaaggaggagcgagagcgggagcggatgcgccagcagttcgacgaggcctccgag
cggtgccgcaccgcgcccatggagggcgtcgccttctcccccgaggacctcgacaccgcc
gtcgagtccactgacatcgacaccgagatcggctcccttattaaaggaacagtattcatg
actacctcaaatggtgcatatattgacatccaatcaaagtctactgctttcttgcctcta
gatgaggcatgccttcttgacattgataatgttgaagatgcgggcattcgccctggttta
gtagaagaattcatgattattgatgagaaccctagcgatgaaactttgattctgagtttg
caagcaattcagcaagaacttgcgtgggaaaggtgccggcaacttcaggctgaggatgtt
gtcgccacgggcaaagtgattggcggaaataaaggaggtgtagtagctcttgtggaaggg
cttaagggatttgttccgttttcccaagtgtcatcgaaaacaactgcggaagagctcctt
ggcaaagaactgcctctcaagtttgtagaggttgatgaggaacagggcaggcttgtcctt
agcaaccgcaaggcaatggctgacagtcaggcccagcttggtattggttcagttgttttg
ggaactgttgagagcctaaaaccttatggtgccttcattgacatcggcggaatcaatggt
cttctccatgtcagccagattagtcatgaccgtgttgcggatatctcaacagttctgcaa
ccaggagacaccctcaaggtgatgatactgagccatgaccgtgaaagaggccgtgtcagc
ctttctacaaagaagcttgagccaacacctggtgacatgatccgcaatcccaagcttgtt
ttcgagaaggccgacgagatggctcagatattcaggcagagaattgctcaagcagaggca
atggctcgtgctgacatgttgagattccagccagagagcggattgacactcagttcagag
ggaatactaggaccattgtcatcagattcaccttcagaggattcaggagaagaacccacg
gacgaatag
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