Panicum virgatum (switchgrass): 120690442
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Entry
120690442 CDS
T07260
Name
(RefSeq) elongator complex protein 5-like
KO
K11376
elongator complex protein 5
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120690442
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
120690442
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Gene cluster
GFIT
Motif
Pfam:
Elong_Iki1
Motif
Other DBs
NCBI-GeneID:
120690442
NCBI-ProteinID:
XP_039829020
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Position
9N:complement(75300056..75303556)
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AA seq
380 aa
AA seq
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MAEAVVRYLRDGRLDGEHAPALALEGSLQCCSLAAGAMLHVAAALASQAAAGRAQARGLV
VVAFDRSPEVYLEFMRRRGLDANALNRCVRILDCYSDPLGWKQKIQNQQHQENSTKQFST
NKENITVFRNVKDVTKLMYSITELGGGFQGEGKRYFSIAVDSISSLLRHASVPSVSGLLS
NLRSHEQGSSIFWLIHTDLHEPKVPRAFECLSTMVACVEPALVDPLCVESPGSMSTLEQN
YSKAKFIVRLKRRNGRVKHFYEDLYVEGNDVKFDSAPASTEVNQSLVPKVQFNLELSEKE
RTDRANVVLPFEHQGKGEPIRIYDGRRSLPEEQRDPNLAPALVDDIVPKSGTAKGEIHYV
RDSDDEQPDSDEDPDDDLDI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggttgtgaggtacctccgggacgggcgcctcgacggcgagcacgcgccg
gcgctggccttggagggatcactccagtgctgctcgctcgccgcgggcgcgatgctccac
gtcgcggccgcactcgcttcccaggccgcggcagggagggcgcaggccagggggttggtg
gttgtggcgttcgatcggagcccggaggtgtacttggaattcatgcggcgccgcggcctt
gacgcaaatgctttgaaccgatgtgttcgaatattggattgctattccgacccccttgga
tggaagcagaagattcaaaaccagcagcatcaagagaacagtacaaagcagttctcaaca
aacaaagagaacattactgtttttagaaatgtgaaggatgttaccaaattgatgtactcc
attactgaactcggaggagggtttcaaggagagggcaaaaggtatttttcaattgctgtt
gactcgattagttctttgttaaggcatgcttcagtgccatcagtttcaggccttcttagt
aatcttcgaagccatgaacaaggatcatcaatcttttggctgatacatacagacctccat
gaaccaaaggtaccccgagcatttgaatgtctttcaactatggttgcttgtgtggagcca
gcacttgtagatcctctatgtgtagaaagtcctggaagcatgtctacactggagcaaaac
tattcaaaagcaaagtttattgtgcgccttaaaagacgaaatggacgggtgaagcacttt
tatgaggacttgtatgttgagggaaatgatgttaaatttgattctgctcctgcaagtaca
gaagtgaaccaaagtctagtacctaaggttcagttcaatctggagctgtcagaaaaagag
cgcactgacagggcaaatgttgttcttccttttgaacatcaaggaaagggtgaaccaatt
cgaatatatgatggtcgccgatccctacctgaggagcaacgagacccaaacttagcacca
gcccttgtggatgatatagttcccaaatctggaactgcgaagggtgagatacattatgtc
cgtgattcagatgacgagcaaccggactcagatgaagatccagatgatgacttggacata
tga
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