Panicum virgatum (switchgrass): 120690454
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Entry
120690454 CDS
T07260
Name
(RefSeq) rhomboid-like protein 15 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120690454
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120690454
Peptidases and inhibitors [BR:
pvir01002
]
Serine peptidases
Family S54: Rhomboid family
120690454
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
UBA
UBA_7
DUF1751
UBA_At5g58720
DUF4355
Motif
Other DBs
NCBI-GeneID:
120690454
NCBI-ProteinID:
XP_039829033
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Position
9N:14834973..14841282
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AA seq
396 aa
AA seq
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MRPNIITEAGIPTRLNQWWSSIPFITSGVVLICGVIYLLCLLVGYDSYDTICFLPSAVAS
HFQVYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMFLLASTNAILHLT
IAFLVAYNPLYPALYLVNECSIGFSGVIFAMIVIETSLSGVQSRSVFGLFNVPAKWYAWI
LLVLFQFLASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSKIEGLSALSVCVRRPGF
ILCTGGTTYGQLPTYSNTSAAPSALINGNFLRNISSWMPNRQTPTVQEGEDPRFPGRART
LGSAGAEPAAREASANLHARLLDNTTPSEPLTNSQHTVANTVRADATVTADQVDTFDEEL
KKLVGMGFEKTQAEVALAAADGDPNVAIEILMSQQG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccaacatcatcaccgaggctgggattccaactaggttgaatcagtggtggagc
agcattccgttcattacttctggtgttgtcttgatatgtggagtaatttatctgctgtgc
ttgttggttggctatgactcctatgacacgatatgcttcttgccttctgcagtagcatca
cattttcaagtttacaggttctacacatctgttctttttcatggttctttgcttcatgtg
ctattcaacatgcttgcattggtacccttgggcacggagttggaaagaattatgggatca
gtccgtctcttattcttgatgttccttcttgcatcaacaaatgcaattctccatctcaca
attgctttcttggttgcttacaatcctttgtaccctgccctgtatcttgtgaatgaatgc
tccattggcttttctggagttatattcgcaatgattgtcattgaaacaagtctgagtggt
gtgcaatcgcgaagtgtcttcggtctcttcaatgttcctgcgaaatggtatgcatggatt
ttactggtactttttcagtttcttgcaagcaatgtttcattgctggggcacctgtgcggc
atcttgtcgggatttgcatacacttatgggcttttcaactacttgcttcctggaccatca
ttttattctaaaattgagggcttgtcagcactatctgtttgtgtgaggcggcctggtttt
attctatgtactggagggactacatatggccagcttcctacatactctaacacgtctgcc
gcaccaagtgctctcataaatggaaatttcttgagaaatatatcttcatggatgccaaac
aggcagacacccactgttcaggaaggagaagaccccaggtttccagggagagcacgaaca
cttggttctgcaggtgctgaacccgctgcaagggaggcaagtgcgaatttgcatgcgagg
ttgttggataacacaactccaagtgaacccctaacgaattcacagcatacagttgcaaac
acagtcagagctgatgcaacggtaacagcagatcaggttgatacatttgatgaagaactt
aagaaactggttgggatgggttttgagaagactcaggctgaagttgcacttgctgcagct
gatggagatccaaacgttgccattgaaattctgatgagtcagcagggctga
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