Panicum virgatum (switchgrass): 120690472
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Entry
120690472 CDS
T07260
Name
(RefSeq) tubulin--tyrosine ligase-like protein 12 isoform X1
KO
K16609
tubulin--tyrosine ligase-like protein 12
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120690472
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Other tubulin modification proteins
120690472
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
LRR_4
LRR_14
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
120690472
NCBI-ProteinID:
XP_039829058
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Position
9N:complement(77139527..77145875)
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AA seq
888 aa
AA seq
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MPSRRRRFRLPAAIAMSPAAAATDGRIRSYEDFARVHAYLLAAAGIPPSLHERLYRKLAD
EVFDGGEVFAVEPCEGGMQRRLVLASEEPLGKESDVFLVDHAWSFRLPDALKQLREVPGL
AERMAALMCVDLDRKVETEESEDEQDDEKNVSLEHVLQVVETERARVQERGTDSAAWLEL
EELGIDDDMLVTLDLSAKFPNVVALNLWGNRLQDTEKVIQEIRKCPKLKALWLNDNPVLG
KGIDKAVLDSLSGLEIYNSRFTSKAGEWALSFCADIVGADNPCSFVESTLLDSIATIDLS
DRCIHKLPEALSPSKLPSLSKLNIRGNPLDQISGDDLLKLLSGFTQLQELEVDIPGPLGN
SAISILESLPNLSFLNGVNSSSIIESGKHIVDSALQPRLPEWSPEESLAERVIGAMWLYL
MTYRLADEEKIDETPVWYVMDELGSAMRHSDIPNFRIAPFLFMPEGKLASAISYTVLWPT
LDVHTGEECTRDFLFGIGEEKQRSARLTAWFHTPENYFIQEFRRYQEQLQSNSICSSTKI
KETPSTKSVRPSDGRALRVYTDIPHVEEFLTRPEFVLTTDPKEADIIWVSMQVDSEVKKA
IGLTDQQYTNQFPFEAYLVMKHHLAETIHKAWGSPEWLQPTYNLETHLSQLIGDYCTRKR
DGLDNLWIMKPWNMARTIDTTVTGDLSAIIRLMETGPKICQKYIERPALFQGRKFDLRYI
VLVRSICPLEIFLSDVFWVRLANNQYTLEKTSFFEYETHFTVMNYIGRMNHMNTPEFVKE
FEREHQVKWLEIHESIRSMIRCVFESTAAVHPEMQNPFSRAIYGVDVMLDSRFKPKILEV
TYCPDCGRACNYDTQALVGSQNTIRGSDFFNTVFGCLFLDEQTNVSPL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgccttcacgccgccgccgcttccgcttgccggcggccatcgccatgtcgccggcggcc
gctgcaaccgacggacgcatccggagctacgaggacttcgcgcgggtgcacgcgtacctg
ctggccgcggccggcatcccgccgtcgctgcacgagcggctgtaccgcaagctcgcggac
gaggtcttcgacggcggggaggtcttcgccgtcgagccctgcgagggagggatgcagagg
cgcctcgtgctcgcctccgaggaaccgctggggaaggagtccgatgtcttcctcgtcgac
cacgcgtggtccttccgcctccctgatgcgctcaagcagttgcgggaagtaccaggattg
gctgaaaggatggcagcattgatgtgtgtggatttggaccggaaggtcgaaactgaagag
tcagaagatgagcaggacgatgagaagaatgtgagcttggaacatgtcttacaagtagtg
gagacagaaagggctagagtacaggaaaggggaactgattctgcagcatggctggaactt
gaggaacttggaattgatgatgatatgctagtaaccttggatctatctgcgaaatttccg
aatgtggtagctctcaacctgtggggaaacaggctgcaggatacagagaaagtcatacaa
gaaatcaggaagtgtccaaagctaaaggcactttggttgaacgacaatcctgttcttggc
aaaggtattgacaaagcagttctagatagtctctctggattggaaatatacaattcacgt
tttacgagtaaagctggagagtgggcattgagtttctgtgctgacattgttggagcagat
aatccctgttcctttgtggaaagcacattgttggatagtattgccactatcgatctttct
gataggtgcattcacaagctaccagaggctctctctcctagtaaactgccatctctgtca
aaattgaacatccgtggtaatcctctggatcaaatttctggtgacgatctccttaagtta
cttagtggatttactcagttacaagagttggaggttgatattcctggtcctctgggaaac
agtgcaatttccattcttgagtctcttcctaatttatcgtttctaaatggtgtgaattct
tcaagtataatagagagtgggaagcatatagttgactctgcacttcaaccgcggcttcca
gaatggtcaccagaagaatccctcgctgaaagagttattggtgcaatgtggttgtatctt
atgacataccggcttgctgatgaagaaaagattgatgaaacacctgtctggtacgtcatg
gatgagttgggctcagccatgcgccacagtgatattccaaacttcagaatagctccattc
ttgttcatgccagaagggaaactagcctctgctataagttacacagttctgtggcccact
cttgatgttcatactggagaagagtgtacccgggatttcttgtttggtattggcgaggag
aaacaacgttcagctaggcttacagcttggtttcacacaccagagaactactttattcag
gaattcaggaggtaccaggaacaactacaatcaaatagcatttgttcttcgacaaaaatt
aaagagacaccctcaaccaaaagtgtacgtccaagtgatggccgtgcacttcgagtatat
actgacatacctcatgtagaggagtttctaacacggccagagtttgttctcacaactgat
ccaaaggaggcggacatcatctgggtaagcatgcaagtggattcagaagtaaagaaggca
atagggctcacggaccaacaatacacaaatcaatttccttttgaagcttacctggtcatg
aagcaccacctagcggagaccatccataaggcatggggctcaccagaatggcttcaacct
acatataacctagagacccatctgtctcaactgattggtgactattgtacaaggaaacga
gatggcctggacaacttatggatcatgaagccttggaacatggcaagaactattgacacc
acagttaccggtgatttatctgctatcatcagacttatggagacaggtcccaagatatgc
caaaaatatatagaacgccctgccctttttcaaggaaggaagtttgatcttcggtacatt
gttttggtccgcagtatatgccctttggagatatttctttctgatgttttctgggttagg
ttagcaaacaatcagtacactttggagaagactagcttttttgagtatgagacccatttc
actgtgatgaattatattggaaggatgaaccatatgaacacgccagagtttgtcaaggag
tttgagagggagcaccaagttaaatggctggagatccatgaaagcatacgttctatgata
cggtgtgtttttgagtcgactgccgctgttcatcctgagatgcagaaccctttctccagg
gccatctatggggtagacgttatgcttgatagcagattcaagccaaagattttagaggtg
acgtactgtccagactgcgggagggcgtgcaactatgacacgcaagctctggtagggagc
cagaataccatcagaggcagtgattttttcaatacggtgtttggctgcctctttctcgac
gagcaaacaaatgtatcgccgttgtaa
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